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AT5G56460.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31541795 (2020): plasma membrane
  • PMID:24030099 (2013): plasma membrane
  • PMID:22318864 (2012): plasma membrane
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:20843791 (2010): plasma membrane
  • PMID:17644812 (2007): plasma membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:15308754 (2004): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G01020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G56460-MONOMEREC:2.7.11.1eggNOG:COG0515eggNOG:KOG1187
EMBL:AB009049EMBL:AY128371EMBL:BT008507EMBL:CP002688
EnsemblPlants:AT5G56460EnsemblPlants:AT5G56460.1entrez:835747GeneID:835747
Genevisible:Q9FM85GO:GO:0004674GO:GO:0005524GO:GO:0005886
GO:GO:0009506Gramene:AT5G56460.1hmmpanther:PTHR27001hmmpanther:PTHR27001:SF76
HOGENOM:HOG000116550InParanoid:Q9FM85InterPro:IPR000719InterPro:IPR001245
InterPro:IPR008271InterPro:IPR011009InterPro:IPR017441iPTMnet:Q9FM85
KEGG:ath:AT5G56460OMA:DEMPKNGPaxDb:Q9FM85Pfam:PF07714
Pfam:Q9FM85Pfscan:PS50011PhylomeDB:Q9FM85PRIDE:Q9FM85
PRO:PR:Q9FM85PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011
ProteinModelPortal:Q9FM85Proteomes:UP000006548RefSeq:NP_200457.1scanprosite:PS00107
scanprosite:PS00108SMR:Q9FM85STRING:3702.AT5G56460.1SUPFAM:SSF56112
TAIR:AT5G56460UniGene:At.29384UniProt:Q9FM85
Coordinates (TAIR10) chr5:+:22865509..22867866
Molecular Weight (calculated) 45873.50 Da
IEP (calculated) 7.55
GRAVY (calculated) -0.34
Length 408 amino acids
Sequence (TAIR10)
(BLAST)
001: MGNCWCRFEP LNHRVSANAK SESPKEQSPT VEDKHIKEVQ KLPSNPKEVE DLRRDSAANP LIAFTYEELK NITSNFRQDR VLGGGGFGSV YKGFIKEDLG
101: DQEVPEPLPV AVKVHDGDNS FQGHREWLAE VIFLGQLSHP NLVKLIGYCC EDNHRVLIYE YMARGSVENN LFSRVLLPLS WAIRMKIAFG AAKGLAFLHE
201: AKKPVIYRDF KTSNILLDMD YNAKLSDFGL AKDGPVGDKS HVSTRIMGTY GYAAPEYIMT GHLTPGSDVY SFGVVLLELL TGRKSLDKSR PTREQNLIDW
301: ALPLLKEKKK VLNIVDPKMN CEYPVKAVQK AAMLAYHCLN RNPKARPLMR DIVDSLEPLQ ATEEEALLVP PVQKAVITII DEMPKNGLKK VEELKKVEEV
401: KKVIEDAC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)