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AT5G55340.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.973
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : MBOAT (membrane bound O-acyl transferase) family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
MBOAT (membrane bound O-acyl transferase) family protein; CONTAINS InterPro DOMAIN/s: Wax synthase (InterPro:IPR017088); BEST Arabidopsis thaliana protein match is: MBOAT (membrane bound O-acyl transferase) family protein (TAIR:AT5G55350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G55340-MONOMERBRENDA:2.3.1.75EC:2.3.1.75eggNOG:ENOG410IKYPeggNOG:ENOG410Y3K5EMBL:AB015479EMBL:AY084724
EMBL:CP002688EnsemblPlants:AT5G55340EnsemblPlants:AT5G55340.1entrez:835627GeneID:835627Genevisible:Q9FJ76GO:GO:0006629
GO:GO:0016021GO:GO:0047196Gramene:AT5G55340.1hmmpanther:PTHR31595hmmpanther:PTHR31595:SF13HOGENOM:HOG000238128InParanoid:Q9FJ76
InterPro:IPR017088InterPro:IPR032805KEGG:00073+2.3.1.75KEGG:ath:AT5G55340OMA:TCLCYCYPaxDb:Q9FJ76Pfam:PF13813
Pfam:Q9FJ76PhylomeDB:Q9FJ76PIRSF:PIRSF037006PRO:PR:Q9FJ76ProteinModelPortal:Q9FJ76Proteomes:UP000006548RefSeq:NP_200345.1
STRING:3702.AT5G55340.1TAIR:AT5G55340TMHMM:TMhelixUniGene:At.64300UniProt:Q9FJ76
Coordinates (TAIR10) chr5:-:22439985..22440986
Molecular Weight (calculated) 38037.70 Da
IEP (calculated) 10.36
GRAVY (calculated) 0.61
Length 333 amino acids
Sequence (TAIR10)
(BLAST)
001: MDEELKNLIK VWVSAIISIS YCYYIPPRIK SGAPRFLSVS PVLALFLVLP LFFSSLHLSL ITAFFLTWLA NFKLILFSFD KGPLIPIPTN FPRFFCFTCF
101: PIKVQQNPKS QNHLPKLVFA IKLAIFAVLL HLYSYRQNLS PTILLGLYFV HLYLEIEIIL TFVKVVVFIS LGCDLEPQSN KPYLATSLQD FWGRRWNLMV
201: PAILRPAVYA PMRRVSERKM SSGWALFPGI LAAFIVSGLV HELLFFYLIR EMPTGEVTLF FVLHGVCTAV ELAVKKKTTV AQRWRLSPGV SRVLTVGFVF
301: VTGGWLFTPQ LKRSGVMERF TSEAVLLVEF IKR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)