AT5G55090.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.973 What is SUBAcon? |
|||||||||||||||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : mitogen-activated protein kinase kinase kinase 15 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of MEKK subfamily | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
mitogen-activated protein kinase kinase kinase 15 (MAPKKK15); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 16 (TAIR:AT4G26890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr5:-:22356852..22358198 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 51132.20 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.09 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.51 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 448 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEEQNWIRGP IIGRGSTATV SLGITNSGDF FAVKSAEFSS SAFLQREQSI LSKLSSPYIV KYIGSNVTKE NDKLMYNLLM EYVSGGSLHD LIKNSGGKLP 101: EPLIRSYTRQ ILKGLMYLHD QGIVHCDVKS QNVMIGGEIA KIVDLGCAKT VEENENLEFS GTPAFMSPEV ARGEEQSFPA DVWALGCTVI EMATGSSPWP 201: ELNDVVAAIY KIGFTGESPV IPVWLSEKGQ DFLRKCLRKD PKQRWTVEEL LQHPFLDEED NDSDQTGNCL NSSSPSTVLD QRFWDLCETS RSRFIKEDHE 301: DPFANSTNFL WDDDSLPGDR IKKLAGDESS GEPDWETNGW IEVRGEIEKR NEEEDENCVE ATSLEEDEEE VGGFENWIWD QQDSLFLEYS PEDNIYYFYS 401: YYNIFDEDII LYYDHLEDCF VLKFDDNNKK IFFFSHITNS CFEITNYN |
||||||||||||||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)