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AT5G54440.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : CLUB
Curator
Summary (TAIR10)
Encodes a putative TRAPPII tethering factor required for cell plate assembly during cytokinesis.
Computational
Description (TAIR10)
CLUB (CLUB); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3758 (InterPro:IPR022233); Has 362 Blast hits to 266 proteins in 127 species: Archae - 0; Bacteria - 0; Metazoa - 146; Fungi - 118; Plants - 63; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XNVFeggNOG:KOG1931EMBL:AB026634EMBL:AY090975
EMBL:CP002688EnsemblPlants:AT5G54440EnsemblPlants:AT5G54440.1entrez:835532
GeneID:835532Genevisible:F4K0C4GO:GO:0000911GO:GO:0000919
GO:GO:0005769GO:GO:0005802GO:GO:0006891GO:GO:0034498
GO:GO:1990071Gramene:AT5G54440.1hmmpanther:PTHR13251InParanoid:F4K0C4
InterPro:IPR022233iPTMnet:F4K0C4KEGG:ath:AT5G54440ncoils:Coil
OMA:HREFGGLPaxDb:F4K0C4Pfam:F4K0C4Pfam:PF11817
Pfam:PF12584PRIDE:F4K0C4PRO:PR:F4K0C4ProteinModelPortal:F4K0C4
Proteomes:UP000006548RefSeq:NP_200255.5STRING:3702.AT5G54440.1TAIR:AT5G54440
tair10-symbols:AtTRS130tair10-symbols:CLUBUniGene:At.28223UniProt:F4K0C4
Coordinates (TAIR10) chr5:+:22100056..22107695
Molecular Weight (calculated) 140689.00 Da
IEP (calculated) 6.10
GRAVY (calculated) -0.18
Length 1259 amino acids
Sequence (TAIR10)
(BLAST)
0001: MANYLAQFQT IKNSCDRLVA AVEDVCDLWP TVKGLFEEHQ PLKRAFLTNK TRNPVFVENL PVEFILTTDA RLRSRFPQEQ YLFWFREPYA TIVLVTCEDL
0101: DEFKNILKPR LKLIVQNDER EWFIVFVSKA HPSNDQATKN VKKVYAKLEV DFSSKKRERC CKLDVHGPEG NFWEDLELKI TECIRNTLDR RAQFYEDEIR
0201: KLSEQRFMPI WNFCNFFILK ESLAFIFEMA HLHEDALREY DELELCYLET VNMPGKQRDF GGFDGEDDQA VLLKPGSKPL TQIVQDDSFR EFEFRQYLFA
0301: CQSRLLFKLN RPFEVASRGY SFVISFAKAL TLHESVLPFC MREVWVITAC LALIEATASH HHDGVVAPDI EKEFFRLQGD LYSLSRVKFM RLGYLIGYGT
0401: DIEKSPLNSA CLSMLPWPKP AVWPSLPQDA SSEVLEKEKT ILQATSRTKH FGIQRKALPL EPSVLLRVAN RRRASLSTGN IPEMFDGRPS FTEGSGLEAS
0501: PRTPSSLKVQ APPMSRTNSS PGNFESPLDR PMRLAEIFVA AEHALRLTIS DHDLLKTLSS IQDFENKYLN LTKGAAENYH RSWWKRHGVV LDGEIAAVCF
0601: KHGKYDLAAN SYEKVCALYA GEGWQDLLAE VLPNLAQCQK ILDDQAGYMS SCVRLLSLDK GLFSSKERQA FQSEVVTLAH SEMKNPVPLD VSSLITFSGN
0701: TGPPLQLCDG DPGNLSVTVW SGFPDDITLD SLSLTLVATN NTDEGGQALK SSAATVLNPG RNTITFALPP QKPGSYVLGV VTGQIGRLRF RSHSFSKGGP
0801: ADSDDFMSYE KPTRPILKVS KPRALVDLAA AVSSALLINE AQWIGIIVRP IAYSLKGAIL HIDTGPGLKI EDSYGIEMER YMDADCDTGA SKAEVFVEDS
0901: PVSSKRDSEV LNLCDGKIVF SDWASNVSSI LWVPVRALSE KLARGSSSVT PLKQDILEGM RTVALKLEFG VHHNQIFERT IAAHFTDPFD VTTRVANKCN
1001: DGTLVLQVML HSLVKANLIV LDVWLDLQDG FIHGQNDGRP TSTFFPLVVS PGSRAAVVFS ICLDKSMSSE GKDLQLPESI LNIKYGIHGD RAAGAHRPVD
1101: ADHSETDTEG RDLVFKSAIV LQRPVLDPCL TVGFLPLPSD GLRVGKLITM QWRVERLKEL KESEAVEQQH DEVLYEVNAN SENWMIAGRK RGHVSLSEEQ
1201: GSRVVISILC VPLVAGYVRP PQLGLPNVEE ANVSSNPSGP HLVCVLPPLL SSSYCLPVK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)