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AT5G54430.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31520498 (2020): mitochondrion
  • PMID:31186290 (2019): plastid plastid stroma
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25641898 (2015): plasma membrane
  • PMID:17317660 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Adenine nucleotide alpha hydrolases-like superfamily protein
Curator
Summary (TAIR10)
Contains a universal stress protein domain. Protein is phosphorylated in response to Phytophthora infestans zoospores and xylanase.
Computational
Description (TAIR10)
PHOS32; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to molecule of fungal origin, response to stress; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT4G27320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JB3GeggNOG:ENOG411179QEMBL:AK118526EMBL:AY070394
EMBL:AY087680EMBL:AY123025EMBL:CP002688EnsemblPlants:AT5G54430
EnsemblPlants:AT5G54430.1entrez:835531Gene3D:3.40.50.620GeneID:835531
GO:GO:0002238GO:GO:0005634GO:GO:0005829GO:GO:0005886
GO:GO:0006950Gramene:AT5G54430.1hmmpanther:PTHR31966hmmpanther:PTHR31966:SF5
InterPro:IPR006015InterPro:IPR006016InterPro:IPR014729KEGG:ath:AT5G54430
OMA:ANIKIKCPfam:PF00582PhylomeDB:Q8VYN9PRINTS:PR01438
Proteomes:UP000006548RefSeq:NP_568808.1STRING:3702.AT5G54430.1SUPFAM:SSF52402
TAIR:AT5G54430tair10-symbols:ATPHOS32tair10-symbols:PHOS32UniGene:At.28615
UniProt:Q8VYN9
Coordinates (TAIR10) chr5:-:22097563..22099693
Molecular Weight (calculated) 26203.80 Da
IEP (calculated) 6.55
GRAVY (calculated) -0.43
Length 242 amino acids
Sequence (TAIR10)
(BLAST)
001: MNPADSDHPQ LPNIKIHHPP SPRHSHHHHS SSTPSSAATP TPTAGARRKI GVAVDLSEES SFAVRWAVDH YIRPGDAVVL LHVSPTSVLF GADWGPLPLK
101: TQIEDPNAQP QPSQEDFDAF TSTKVADLAK PLKELGFPYK IHIVKDHDMR ERLCLEIERL GLSAVIMGSR GFGAEKKRGS DGKLGSVSDY CVHHCVCPVV
201: VVRYPDDRDG PVPIVTVKSG GDDDGDVVAA SASAHHEHIK DE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)