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AT5G53650.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
DNASU:835446eggNOG:ENOG410J3QTeggNOG:ENOG410ZBZMEMBL:AB015476EMBL:AK119088EMBL:AY084399EMBL:BT004659
EMBL:CP002688EnsemblPlants:AT5G53650EnsemblPlants:AT5G53650.1entrez:835446GeneID:835446GO:GO:0016021Gramene:AT5G53650.1
hmmpanther:PTHR34970hmmpanther:PTHR34970:SF2HOGENOM:HOG000241558KEGG:ath:AT5G53650OMA:DYKVAHEPhylomeDB:Q9FJB9Proteomes:UP000006548
RefSeq:NP_568796.1STRING:3702.AT5G53650.1TAIR:AT5G53650TMHMM:TMhelixUniGene:At.42955UniProt:Q9FJB9
Coordinates (TAIR10) chr5:+:21791265..21792242
Molecular Weight (calculated) 8029.46 Da
IEP (calculated) 7.69
GRAVY (calculated) -0.15
Length 72 amino acids
Sequence (TAIR10)
(BLAST)
1: MGYVFRVRLA SFFAGAATAS FIGLSVLYKD YKVAHESISQ QAKSFHDSLD RRISTLESLR QSEAPQLAET TE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)