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AT5G53450.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : OBP3-responsive gene 1
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
OBP3-responsive gene 1 (ORG1); FUNCTIONS IN: structural molecule activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase PLK4 (InterPro:IPR020664), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Plastid lipid-associated protein/fibrillin (InterPro:IPR006843), Protein kinase-like domain (InterPro:IPR011009); Has 595 Blast hits to 591 proteins in 152 species: Archae - 0; Bacteria - 3; Metazoa - 162; Fungi - 48; Plants - 309; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XPP3eggNOG:KOG0594EMBL:AB020754EMBL:AK319099EMBL:AY065207EMBL:BT002001EMBL:BT008410
EMBL:CP002688EnsemblPlants:AT5G53450EnsemblPlants:AT5G53450.1EnsemblPlants:AT5G53450.2entrez:835426ExpressionAtlas:Q9LV04GeneID:835426
Genevisible:Q9LV04GO:GO:0004672GO:GO:0005524GO:GO:0009507hmmpanther:PTHR24056hmmpanther:PTHR24056:SF181HOGENOM:HOG000006303
InParanoid:Q9LV04IntAct:Q9LV04InterPro:IPR000719InterPro:IPR006843InterPro:IPR011009iPTMnet:Q9LV04KEGG:ath:AT5G53450
OMA:QIPPEMFPaxDb:Q9LV04Pfam:PF00069Pfam:PF04755Pfam:Q9LV04Pfscan:PS50011PhylomeDB:Q9LV04
PRIDE:Q9LV04PRO:PR:Q9LV04PROSITE:PS50011ProteinModelPortal:Q9LV04Proteomes:UP000006548RefSeq:NP_200157.2RefSeq:NP_851182.1
SMART:SM00220STRING:3702.AT5G53450.1SUPFAM:SSF56112TAIR:AT5G53450tair10-symbols:ORG1UniGene:At.28565UniProt:Q9LV04
Coordinates (TAIR10) chr5:+:21689204..21692242
Molecular Weight (calculated) 75770.70 Da
IEP (calculated) 9.81
GRAVY (calculated) -0.24
Length 670 amino acids
Sequence (TAIR10)
(BLAST)
001: MALCGVCSTP NLPNLQVFRS VRNSSIGYKR NHSLWQLRSS SFRAKSVIFH CSSSLRQSPS NVEEIDDNPS VSLEDESAHV MQFKWSDFRI LDRVSIGHGG
101: RADELVFEAI VQVPDSPLFN QGVVLRKLNT TRAQRRGRRA IEVFKKLVRR RLLYHSYSMQ VHGYITNNLS DDQYSFTLVH GCHGSFSIRH WLQQSDWIPT
201: LEATLALDEE SFRRVGDDTT GGPAVSRQLR LIRTLMRDIL IGVNYLHSHG LAHTELRLEN VHISPVDRHI KVGILGNAAD FNGDVPSTSN AYSTMDRRQM
301: MIAFDMRCVG FMMAKMVLQE LMDPLIFAKL KSFLAKGNDP SSLREFFVTT LNTNSESGNT GVQILDRNWG AGWHLLSLLI ATRPSERISC LDALKHPFLC
401: GPRWRVAPSM DIIRWGLGST AVKISEEYIY RMPQRQRLAH FIGLMEMLNP YPKPNCWLEL LPGRWRLLYS TGKHIGLTLR QPSTRALIGN VHLTITRASE
501: SINNTSLSFT SDIRFTAITS KDWPHNKIGA AGKLQTLSQF RLIAGKRLYL KEEKKNIGKF SMGEPDAEEG LAEKLETEKW KKVVPFKEFP SSLPVAKLVS
601: GEIEVTMNMN DHIDSPGSVI GEVRKQIPPE MFDLSKLVCG TYIDSRLLVL RCVNGSALLF TRSSLDHKSM
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)