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AT5G53160.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : regulatory components of ABA receptor 3
Curator
Summary (TAIR10)
Encodes RCAR3, a regulatory component of ABA receptor. Interacts with protein phosphatase 2Cs ABI1 and ABI2. Stimulates ABA signaling.
Computational
Description (TAIR10)
regulatory components of ABA receptor 3 (RCAR3); CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: PYR1-like 10 (TAIR:AT4G27920.1); Has 397 Blast hits to 397 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 397; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IIK9eggNOG:ENOG4111HU5EMBL:CP002688EnsemblPlants:AT5G53160EnsemblPlants:AT5G53160.1entrez:835397ExpressionAtlas:F4KJ16
Gene3D:3.30.530.20GeneID:835397Gramene:AT5G53160.1hmmpanther:PTHR31213hmmpanther:PTHR31213:SF12InterPro:IPR019587InterPro:IPR023393
OMA:ITSTCIFPaxDb:F4KJ16Pfam:PF10604PhylomeDB:F4KJ16PRIDE:F4KJ16ProteinModelPortal:F4KJ16Proteomes:UP000006548
RefSeq:NP_851180.1SMR:F4KJ16STRING:3702.AT5G53160.2SUPFAM:SSF55961TAIR:AT5G53160tair10-symbols:PYL8tair10-symbols:RCAR3
UniGene:At.24684UniGene:At.72721UniProt:F4KJ16
Coordinates (TAIR10) chr5:+:21561026..21561780
Molecular Weight (calculated) 18183.90 Da
IEP (calculated) 9.52
GRAVY (calculated) -0.40
Length 157 amino acids
Sequence (TAIR10)
(BLAST)
001: MEANGIENLT NPNQEREFIR RHHKHELVDN QCSSTLVKHI NAPVHIVWSL VRRFDQPQKY KPFISRCVVK GNMEIGTVRE VDVKSGLPAT RSTERLELLD
101: DNEHILSIRI VGGDHRLKVI NESKGSFSVY SESKTYMFYI VFGFRTILQS SLFTPRL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)