AT5G52350.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.998 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : exocyst subunit exo70 family protein A3 | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. | ||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
exocyst subunit exo70 family protein A3 (EXO70A3); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein A2 (TAIR:AT5G52340.1); Has 927 Blast hits to 920 proteins in 144 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 116; Plants - 647; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:21254911..21257618 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 67575.70 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.08 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.45 | ||||||||||||||||||||||||||||||||||||
| Length | 586 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSNVLDKTNL HELSIAPKIS THDEKLYECT KCGIFFHRDS VESATEINPH ENLGEVRAVE DKPNNESIKV DERGTCNFHF IDEHHGKVDG INTEYDASKF 101: KQILENYSKL TEPNQLFECL PSNLRPPSDD EGSDGKSHDP QSNGLGKTDY TVPTIIPPTV LPVLHDLAQQ MVKAGHQQEL FKTYRDIRRA VLAQSLEKLG 201: VERHSKYDVE RMNQDVFEAK IMNWIHYIRI SVKLLFAAEK EICHQILDGV EPFRDQSFAE ITTISFGMLL SFGYAIAISR RSPEKVFVIL DMYEIMIELQ 301: PEFELIFGSK PCTEMKEDAL NLTKLLAQTV KETIADFEVA IEMDATETVV MDGSVHALTS YVARYVKFLF DYEPTLRQLF QEFNSNDPDT KLKSVMTGIM 401: RALRNNLDGK SRQFEDAALT QLFLMNNVYY IVRNFRREEA KNFLGDDLVQ THRRIVQQHA KQYQTISWNK ILQCITVQSS KSGLIKNESI KKTLVKEKFK 501: TFNSQFEELH QRQCQWSVSD VELRESLRLA IAEVLLPAYG SFLKRFGPMI ESGKNSQKYI RFTPEDLERM LNDFFQGKNL DVSPKR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)