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AT5G52200.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.996
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : phosphoprotein phosphatase inhibitors
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
phosphoprotein phosphatase inhibitors; FUNCTIONS IN: phosphoprotein phosphatase inhibitor activity; INVOLVED IN: regulation of signal transduction, regulation of phosphoprotein phosphatase activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase inhibitor 2 (IPP-2) (InterPro:IPR007062); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IZRYeggNOG:ENOG410YIQAEMBL:AB025603EMBL:AY050347EMBL:AY116938EMBL:CP002688EnsemblPlants:AT5G52200
EnsemblPlants:AT5G52200.1entrez:835296ExpressionAtlas:Q9LTK0GeneID:835296GO:GO:0004864GO:GO:0009966GO:GO:0043666
Gramene:AT5G52200.1hmmpanther:PTHR12398HOGENOM:HOG000239228IntAct:Q9LTK0InterPro:IPR007062Pfam:PF04979PhylomeDB:Q9LTK0
Proteomes:UP000006548RefSeq:NP_568768.1SMR:Q9LTK0STRING:3702.AT5G52200.2TAIR:AT5G52200UniGene:At.7108UniProt:Q9LTK0
Coordinates (TAIR10) chr5:-:21202818..21204719
Molecular Weight (calculated) 21098.50 Da
IEP (calculated) 4.40
GRAVY (calculated) -1.37
Length 191 amino acids
Sequence (TAIR10)
(BLAST)
001: MTEPKRGRVQ WDEANIVEIE SNKPVRQKIT EPKTPYHPMM DDDGSLSPRG RAFDECVDDM QRAEELRNVL NDAAASSSRN SSQGSGGGGW SSSDEEEEEA
101: DPMDQDEEGS GSGKNERFNA HRKAHYDEFR KVKELRSSGS FYEEEEEEDD GAKGSKSETT TNSRHTKGGN KELDATKTVS GTSSSSSPEL I
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)