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AT5G51830.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:27943495 (2017): mitochondrion
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:21166475 (2011): cytosol
  • PMID:20061580 (2010): plastid plastid envelope
  • PMID:20061580 (2010): plastid plastid stroma
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : pfkB-like carbohydrate kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT1G66430.1); Has 18609 Blast hits to 18603 proteins in 2379 species: Archae - 380; Bacteria - 13935; Metazoa - 140; Fungi - 105; Plants - 504; Viruses - 0; Other Eukaryotes - 3545 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G51830-MONOMEREC:2.7.1.4eggNOG:COG0524eggNOG:KOG2855EMBL:AB010074EMBL:AF370289EMBL:AY063037
EMBL:CP002688EnsemblPlants:AT5G51830EnsemblPlants:AT5G51830.1entrez:835258Gene3D:3.40.1190.20GeneID:835258Genevisible:Q9FLH8
GO:GO:0004747GO:GO:0005524GO:GO:0005829GO:GO:0006014GO:GO:0008865GO:GO:0019252GO:GO:0046686
Gramene:AT5G51830.1gramene_pathway:2.7.1.4gramene_pathway:PWY-621hmmpanther:PTHR10584hmmpanther:PTHR10584:SF192HOGENOM:HOG000235951InParanoid:Q9FLH8
InterPro:IPR002139InterPro:IPR002173InterPro:IPR011611InterPro:IPR029056KEGG:ath:AT5G51830KO:K00847OMA:HESELDI
PaxDb:Q9FLH8Pfam:PF00294Pfam:Q9FLH8PhylomeDB:Q9FLH8PRIDE:Q9FLH8PRINTS:PR00990PRO:PR:Q9FLH8
PROSITE:PS00583PROSITE:PS00584ProteinModelPortal:Q9FLH8Proteomes:UP000006548RefSeq:NP_199996.1scanprosite:PS00583scanprosite:PS00584
SMR:Q9FLH8STRING:3702.AT5G51830.1SUPFAM:SSF53613TAIR:AT5G51830UniGene:At.22103UniPathway:UPA00152UniProt:Q9FLH8
Coordinates (TAIR10) chr5:+:21069709..21071450
Molecular Weight (calculated) 37030.50 Da
IEP (calculated) 4.75
GRAVY (calculated) -0.01
Length 343 amino acids
Sequence (TAIR10)
(BLAST)
001: MGEDAISGNL KNLTIDTRDS ETLVVCFGEM LIDFVPTVGG VSLAEAPAFK KAPGGAPANV AVGVSRLGGS SAFIGKVGDD EFGRMLADIL RLNNVDNSGM
101: RFDHNARTAL AFVTLRGDGE REFLFFRHPS ADMLLLESEL DKNLIQKAKI FHYGSISLIE EPCRSTQLVA MKIAKAAGSL LSYDPNLRLP LWPSEEAARK
201: EIMSIWNLAD VIKISEDEIT FLTGGDDPYD DDVVLQKLFH PNLKLLVVSE GPNGCRYYTQ EFKGRVGGVK VKPVDTTGAG DAFVSGLLNS LASDLTLLKD
301: EKKLREALLF ANACGAITVT ERGAIPAMPS MDAVQDLLSS TRS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)