AT5G51750.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : subtilase 1.3 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
subtilase 1.3 (SBT1.3); FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: apoplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT5G67360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:21020266..21022608 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 84954.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.78 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.23 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 780 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MANKNPLQKP FLFIILSINL IFLQAETTTQ ISTKKTYVIH MDKSAMPLPY TNHLQWYSSK INSVTQHKSQ EEEGNNNRIL YTYQTAFHGL AAQLTQEEAE 101: RLEEEDGVVA VIPETRYELH TTRSPTFLGL ERQESERVWA ERVTDHDVVV GVLDTGIWPE SESFNDTGMS PVPATWRGAC ETGKRFLKRN CNRKIVGARV 201: FYRGYEAATG KIDEELEYKS PRDRDGHGTH TAATVAGSPV KGANLFGFAY GTARGMAQKA RVAAYKVCWV GGCFSSDILS AVDQAVADGV QVLSISLGGG 301: VSTYSRDSLS IATFGAMEMG VFVSCSAGNG GPDPISLTNV SPWITTVGAS TMDRDFPATV KIGTMRTFKG VSLYKGRTVL PKNKQYPLVY LGRNASSPDP 401: TSFCLDGALD RRHVAGKIVI CDRGVTPRVQ KGQVVKRAGG IGMVLTNTAT NGEELVADSH MLPAVAVGEK EGKLIKQYAM TSKKATASLE ILGTRIGIKP 501: SPVVAAFSSR GPNFLSLEIL KPDLLAPGVN ILAAWTGDMA PSSLSSDPRR VKFNILSGTS MSCPHVSGVA ALIKSRHPDW SPAAIKSALM TTAYVHDNMF 601: KPLTDASGAA PSSPYDHGAG HIDPLRATDP GLVYDIGPQE YFEFLCTQDL SPSQLKVFTK HSNRTCKHTL AKNPGNLNYP AISALFPENT HVKAMTLRRT 701: VTNVGPHISS YKVSVSPFKG ASVTVQPKTL NFTSKHQKLS YTVTFRTRFR MKRPEFGGLV WKSTTHKVRS PVIITWLPPL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)