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AT5G51720.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : 2 iron, 2 sulfur cluster binding
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
2 iron, 2 sulfur cluster binding; FUNCTIONS IN: 2 iron, 2 sulfur cluster binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Iron sulphur-containing domain, CDGSH-type (InterPro:IPR018967); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
DNASU:835246eggNOG:ENOG41122IIeggNOG:KOG3461EMBL:AB010074EMBL:AF372888EMBL:AY057716EMBL:AY086662
EMBL:CP002688EnsemblPlants:AT5G51720EnsemblPlants:AT5G51720.1entrez:835246GeneID:835246Genevisible:Q9FLI7GO:GO:0005739
GO:GO:0009507GO:GO:0009570GO:GO:0010150GO:GO:0046872GO:GO:0051537GO:GO:0055072GO:GO:0072593
Gramene:AT5G51720.1hmmpanther:PTHR13680HOGENOM:HOG000242301InParanoid:Q9FLI7InterPro:IPR018967KEGG:ath:AT5G51720OMA:HNKANGD
PaxDb:Q9FLI7PDB:3S2QPDB:3S2RPDBsum:3S2QPDBsum:3S2RPfam:PF09360Pfam:Q9FLI7
PhylomeDB:Q9FLI7PRIDE:Q9FLI7PRO:PR:Q9FLI7ProteinModelPortal:Q9FLI7Proteomes:UP000006548RefSeq:NP_568764.1SMART:SM00704
SMR:Q9FLI7STRING:3702.AT5G51720.1TAIR:AT5G51720UniGene:At.9105UniProt:Q9FLI7
Coordinates (TAIR10) chr5:+:21009645..21010227
Molecular Weight (calculated) 11627.10 Da
IEP (calculated) 9.70
GRAVY (calculated) -0.32
Length 108 amino acids
Sequence (TAIR10)
(BLAST)
001: MAIIASTFGT GLSYAGELPF KPVTGGEVGR KQQRMVVVRA EGGGGINPEI RKNEDKVVDS VVVTELSKNI TPYCRCWRSG TFPLCDGSHV KHNKANGDNV
101: GPLLLKKQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)