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AT5G51560.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.959
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G45340.1); Has 121137 Blast hits to 67280 proteins in 2103 species: Archae - 75; Bacteria - 4844; Metazoa - 26993; Fungi - 2860; Plants - 75694; Viruses - 184; Other Eukaryotes - 10487 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G51560-MONOMEReggNOG:ENOG410IEMPeggNOG:ENOG4111HDQEMBL:AB018109EMBL:CP002688EMBL:FJ708800EnsemblPlants:AT5G51560
EnsemblPlants:AT5G51560.1entrez:835230Gene3D:2.60.120.200Gene3D:3.80.10.10GeneID:835230GO:GO:0004672GO:GO:0005524
GO:GO:0016021Gramene:AT5G51560.1hmmpanther:PTHR27008hmmpanther:PTHR27008:SF29InterPro:IPR000719InterPro:IPR001245InterPro:IPR001611
InterPro:IPR011009InterPro:IPR013210InterPro:IPR013320InterPro:IPR032675KEGG:ath:AT5G51560OMA:QYRRRKQPfam:PF07714
Pfam:PF08263Pfam:PF13855Pfscan:PS50011PhylomeDB:Q9FHM8PROSITE:PS50011Proteomes:UP000006548RefSeq:NP_199969.1
SMR:Q9FHM8STRING:3702.AT5G51560.1SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT5G51560TMHMM:TMhelixUniGene:At.29672
UniProt:Q9FHM8
Coordinates (TAIR10) chr5:+:20945807..20948613
Molecular Weight (calculated) 74755.80 Da
IEP (calculated) 7.93
GRAVY (calculated) -0.14
Length 680 amino acids
Sequence (TAIR10)
(BLAST)
001: MTATQMLLHL LLLPLLFLHF SNQVMAEITD ELATLMEVKT ELDPEDKHLA SWSVNGDLCK DFEGVGCDWK GRVSNISLQG KGLSGKISPN IGKLKHLTGL
101: FLHYNALVGD IPRELGNLSE LTDLYLNVNN LSGEIPSNIG KMQGLQVLQL CYNNLTGSIP RELSSLRKLS VLALQSNKLT GAIPASLGDL SALERLDLSY
201: NHLFGSVPGK LASPPLLRVL DIRNNSLTGN VPPVLKRLNE GFSFENNLGL CGAEFSPLKS CNGTAPEEPK PYGATVFGFP SRDIPESANL RSPCNGTNCN
301: TPPKSHQGAI LIGLVVSTIA LSAISILLFT HYRRRKQKLS TTYEMSDNRL NTVGGGFRKN NGSPLASLEY TNGWDPLSDN RNLSVFAQEV IQSFRFNLEE
401: VETATQYFSE VNLLGRSNFS ATYKGILRDG SAVAIKRFSK TSCKSEEPEF LKGLNMLASL KHENLSKLRG FCCSRGRGEC FLIYDFAPNG NLLSYLDLKD
501: GDAHVLDWST RVSIAKGIAK GIAYLHSYKG SKPALVHQNI SAEKVLIDQR YSPLLSNSGL HTLLTNDIVF SALKDSAAMG YLAPEYTTTG RFTEKTDVYA
601: FGILVFQIIS GKQKVRHLVK LGTEACRFND YIDPNLQGRF FEYEATKLAR IAWLCTHESP IERPSVEAVV HELGNCSSCL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)