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AT5G51350.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Leucine-rich repeat transmembrane protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich repeat transmembrane protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G61480.1); Has 108404 Blast hits to 45100 proteins in 1144 species: Archae - 34; Bacteria - 5225; Metazoa - 23563; Fungi - 1032; Plants - 70560; Viruses - 18; Other Eukaryotes - 7972 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G51350-MONOMEReggNOG:COG4886eggNOG:ENOG410IEHFEMBL:AB025621EMBL:CP002688EMBL:FJ708799EnsemblPlants:AT5G51350
EnsemblPlants:AT5G51350.1entrez:835209Gene3D:3.80.10.10GeneID:835209GO:GO:0004672GO:GO:0005524GO:GO:0005886
GO:GO:0016021GO:GO:2000604Gramene:AT5G51350.1hmmpanther:PTHR27000hmmpanther:PTHR27000:SF181HOGENOM:HOG000116551InterPro:IPR000719
InterPro:IPR001611InterPro:IPR008271InterPro:IPR011009InterPro:IPR013210InterPro:IPR032675KEGG:ath:AT5G51350OMA:PWQLGNM
Pfam:PF00069Pfam:PF00560Pfam:PF08263Pfam:PF13855Pfscan:PS50011PhylomeDB:Q9FGN6PROSITE:PS00108
PROSITE:PS50011Proteomes:UP000006548RefSeq:NP_199948.1scanprosite:PS00108SMART:SM00220SMR:Q9FGN6STRING:3702.AT5G51350.1
SUPFAM:SSF52047SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT5G51350TMHMM:TMhelixUniGene:At.55486UniProt:Q9FGN6
Coordinates (TAIR10) chr5:-:20867860..20870621
Molecular Weight (calculated) 98912.10 Da
IEP (calculated) 7.03
GRAVY (calculated) -0.03
Length 895 amino acids
Sequence (TAIR10)
(BLAST)
001: MASSKHNKLC SFFYLCLFLT LVAAAEPQTE SLLTLKSQLT DNFNSLKDWF INTPEVSDNL VACCSWSGVR CNQNSTSVVS VDLSSKNLAG SLSGKEFLVF
101: TELLELNISD NSFSGEFPAE IFFNMTNLRS LDISRNNFSG RFPDGNGGDS SLKNLIFLDA LSNSFSGPLP IHLSQLENLK VLNLAGSYFT GSIPSQYGSF
201: KNLEFLHLGG NLLSGHIPQE LGNLTTLTHM EIGYNSYEGV IPWEIGYMSE LKYLDIAGAN LSGFLPKHFS NLTKLESLFL FRNHLSREIP WELGEITSLV
301: NLDLSDNHIS GTIPESFSGL KNLRLLNLMF NEMSGTLPEV IAQLPSLDTL FIWNNYFSGS LPKSLGMNSK LRWVDVSTNS FQGEIPQGIC SRGVLFKLIL
401: FSNNFTGTLS PSLSNCSTLV RIRLEDNSFS GVIPFSFSEI PDISYIDLSR NKLTGGIPLD ISKATKLDYF NISNNPELGG KLPPHIWSAP SLQNFSASSC
501: SISGGLPVFE SCKSITVIEL SNNNISGMLT PTVSTCGSLK KMDLSHNNLR GAIPSDKVFQ SMGKHAYESN ANLCGLPLKS CSAYSSRKLV SVLVACLVSI
601: LLMVVAALAL YYIRQRSQGQ WKMVSFAGLP HFTADDVLRS FGSPEPSEAV PASVSKAVLP TGITVIVRKI ELHDKKKSVV LNVLTQMGNA RHVNLVRLLG
701: FCYNNHLVYV LYDNNLHTGT TLAEKMKTKK KDWQTKKRII TGVAKGLCFL HHECLPAIPH GDVKSSNILF DDDKIEPCLG EFGFKYMLHL NTDQMNDVIR
801: VEKQKDVYNF GQLILEILTN GKLMNAGGLM IQNKPKDGLL REVYTENEVS SSDFKQGEVK RVVEVALLCI RSDQSDRPCM EDALRLLSEA ENRFK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)