AT5G51210.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:vacuole 1.000 ASURE: vacuole What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : oleosin3 | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes oleosin3, a protein found in oil bodies, involved in seed lipid accumulation. | ||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
oleosin3 (OLEO3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lipid storage; LOCATED IN: monolayer-surrounded lipid storage body, integral to membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Oleosin (InterPro:IPR000136); BEST Arabidopsis thaliana protein match is: oleosin 1 (TAIR:AT4G25140.1); Has 527 Blast hits to 527 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 527; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:20820171..20820706 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 14853.10 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.46 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.29 | ||||||||||||||||||||||||||||||||
| Length | 141 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MADQTRTHHE MISRDSTQEA HPKARQMVKA ATAVTAGGSL LVLSGLTLAG TVIALTVATP LLVIFSPVLV PAVVTVALII TGFLASGGFG IAAITAFSWL 101: YRHMTGSGSD KIENARMKVG SRVQDTKYGQ HNIGVQHQQV S |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)