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AT5G51180.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.988
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF676, hydrolase-like (InterPro:IPR007751); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G25770.1); Has 744 Blast hits to 735 proteins in 176 species: Archae - 0; Bacteria - 2; Metazoa - 141; Fungi - 291; Plants - 177; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink).
Protein Annotations
DNASU:835192eggNOG:ENOG410IQFVeggNOG:ENOG410XSXJEMBL:AK316742EMBL:AY050875EMBL:AY091211EMBL:CP002688
EnsemblPlants:AT5G51180EnsemblPlants:AT5G51180.1EnsemblPlants:AT5G51180.2entrez:835192ESTHER:arath-AT5G51180Gene3D:3.40.50.1820GeneID:835192
GO:GO:0016787Gramene:AT5G51180.1Gramene:AT5G51180.2hmmpanther:PTHR12482hmmpanther:PTHR12482:SF14IntAct:Q949V0InterPro:IPR007751
InterPro:IPR029058KEGG:ath:AT5G51180OMA:EHIIDHFPfam:PF05057PhylomeDB:Q949V0Proteomes:UP000006548RefSeq:NP_568754.1
RefSeq:NP_851167.1STRING:3702.AT5G51180.1SUPFAM:SSF53474TAIR:AT5G51180UniGene:At.26554UniProt:Q949V0
Coordinates (TAIR10) chr5:+:20797360..20799929
Molecular Weight (calculated) 40045.40 Da
IEP (calculated) 5.40
GRAVY (calculated) -0.35
Length 357 amino acids
Sequence (TAIR10)
(BLAST)
001: MEKHEEENGL CKAESVDGSL DVWSCQNSDS SSADHLVVMV HGILGSTDDW KFGAEQFVKK MPDKVFVHCS EKNVSALTLD GVDVMGERLA AEVLDIIQRK
101: PNICKISFVA HSLGGLAARY AIGKLYKPAN QEDVKDSVAD SSQETPKGTI CGLEAMNFIT VATPHLGSMG NKQVPFLFGF SSIEKVAGLI IHWIFKRTGR
201: HLFLKDEEEG KPPLLRRMVE DTDDCHFISA LRAFKRRVAY SNVGHDHVVG WKTASIRRDS ELPKWEDSLN EKYPHIVYEE LCKACDMEDI PEGENHSDDI
301: EEEMIKGLSS VSWEKVDVSF HSSRQRFAAH SVIQVKNEDM HIEGADVIEH IIDHFHA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)