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AT5G51010.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Rubredoxin-like superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Rubredoxin-like superfamily protein; FUNCTIONS IN: electron carrier activity, metal ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rubredoxin-type Fe(Cys)4 protein (InterPro:IPR004039); BEST Arabidopsis thaliana protein match is: rubredoxin family protein (TAIR:AT5G17170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IX3CeggNOG:ENOG4111VMQEMBL:AB017063EMBL:AY050768EMBL:AY079348EMBL:AY086803EMBL:CP002688
EnsemblPlants:AT5G51010EnsemblPlants:AT5G51010.1entrez:835174Gene3D:2.20.28.10GeneID:835174GO:GO:0005506GO:GO:0016021
Gramene:AT5G51010.1hmmpanther:PTHR17130hmmpanther:PTHR17130:SF25HOGENOM:HOG000243839IntAct:Q9FI47InterPro:IPR004039InterPro:IPR024934
KEGG:ath:AT5G51010OMA:AALYFYVPfscan:PS50903PhylomeDB:Q9FI47PROSITE:PS50903Proteomes:UP000006548RefSeq:NP_568749.1
SMR:Q9FI47STRING:3702.AT5G51010.1SUPFAM:SSF57802TAIR:AT5G51010TMHMM:TMhelixUniGene:At.20990UniGene:At.49159
UniProt:Q9FI47
Coordinates (TAIR10) chr5:+:20744615..20745344
Molecular Weight (calculated) 17231.00 Da
IEP (calculated) 10.32
GRAVY (calculated) -0.28
Length 154 amino acids
Sequence (TAIR10)
(BLAST)
001: MAMQLPPTTL YAGRSSVVLP PTTPTLQRSS FLPYYSMRLL GNKKSLSKSS APRFSMRVSS KQAYICRDCG YIYNDRTPFD KLPDNYFCPV CAAPKRRFRA
101: YMPDVSKNVN DKDVRKARKA ELQRDEAVGK ALPIGIAVGV LALAALYFYV NSTS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)