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AT5G50820.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : NAC domain containing protein 97
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
NAC domain containing protein 97 (NAC097); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 83 (TAIR:AT5G13180.1); Has 2430 Blast hits to 2425 proteins in 69 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2430; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JSQ6eggNOG:ENOG41108KREMBL:AB025617EMBL:CP002688EnsemblPlants:AT5G50820EnsemblPlants:AT5G50820.1entrez:835154
GeneID:835154GO:GO:0003677GO:GO:0003700GO:GO:0005634GO:GO:0006351Gramene:AT5G50820.1hmmpanther:PTHR31719
hmmpanther:PTHR31719:SF22HOGENOM:HOG000152463IntAct:Q9FGQ1InterPro:IPR003441KEGG:ath:AT5G50820OMA:EMVEDEHPfam:PF02365
Pfscan:PS51005PhylomeDB:Q9FGQ1PROSITE:PS51005Proteomes:UP000006548RefSeq:NP_199895.3SMR:Q9FGQ1STRING:3702.AT5G50820.1
SUPFAM:SSF101941TAIR:AT5G50820tair10-symbols:anac097tair10-symbols:NAC097UniGene:At.50523UniProt:Q9FGQ1
Coordinates (TAIR10) chr5:+:20679225..20680006
Molecular Weight (calculated) 22778.80 Da
IEP (calculated) 4.68
GRAVY (calculated) -0.88
Length 193 amino acids
Sequence (TAIR10)
(BLAST)
001: MDISAQRFAM NGRSMRLPPG FRFDPDDEDL VFEYLAKKVL HRPMDFDLPE LRSCNVDPWD LLGEKNKEVY YFVKKEERER KGRETLSGYW EECEEEEVME
101: AGGRDCIHLE GRRKTFAFFI GKKPRGTITP WIMYEFRLLS SRATRWSSSP LPRGEVGKWR AVKVVVKEEN DEEMVEDEHE SDESDGEEVI QSR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)