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AT5G50410.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IVREeggNOG:ENOG4111FD2EMBL:AB012248EMBL:BT012637
EMBL:CP002688EnsemblPlants:AT5G50410EnsemblPlants:AT5G50410.1entrez:835109
GeneID:835109Gramene:AT5G50410.1HOGENOM:HOG000090966KEGG:ath:AT5G50410
OMA:NQRTEPSPhylomeDB:Q9FK31Proteomes:UP000006548RefSeq:NP_199852.1
TAIR:AT5G50410UniGene:At.29732UniProt:Q9FK31
Coordinates (TAIR10) chr5:-:20528446..20529816
Molecular Weight (calculated) 30132.40 Da
IEP (calculated) 7.90
GRAVY (calculated) -0.98
Length 259 amino acids
Sequence (TAIR10)
(BLAST)
001: MSNSSDKTLE DEKVQQQQLE SDDKISNTNQ RTEPSQEWET MARAWVSAFP DAKAVVSAGE VETWIGTNLD SLPADLRHMP RSEIVDRLLS IQHYMRPTPS
101: SDQNEQNVEA DQQHPARFQR TDQWLPVYSW LESLDNGELV KSKDISEWLD ANPEVKQELS SRHSRYHLTH YVKKCHLKIL KRKEKKGLIR LSRATAMEVH
201: KEFGEKHHAT LSADPMSNIP KDSDLYRTKQ KEAKRRFEIL VELEKRLAPH FAKPRIGNR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)