AT5G50330.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 0.671 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase, catalytic domain (InterPro:IPR000719), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G24810.2); Has 9594 Blast hits to 9572 proteins in 1815 species: Archae - 124; Bacteria - 4421; Metazoa - 409; Fungi - 573; Plants - 708; Viruses - 16; Other Eukaryotes - 3343 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:20485406..20488563 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 54632.60 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.67 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.26 | ||||||||||||||||||||||||||||||||||||
| Length | 479 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MHGFDFKEIQ EKISDSFRPW QRSFQFWVRA TNIYTGYKVF QLRVSLVKDA KKQEEMWERQ HEQAADKIYF MCSDLGGFFL KIAQLLAKPD MAPAAWVKKL 101: VTLCDQAPAT PFDAIQLVLE KELGKSIGEI FETFDEKPLG SASIAQVHRA IVKGNKMNVV VKVQHPGIER LMMTDIRNLQ LFALYMQRTD IKFDLHSITK 201: EMEKQIGYEF DFKREANAME RIRCFLYENN KKSPVLVPRV LRDMVTKRVL VMEYINGIPI LSIGDEMAKR GINPHGKIAE AAKHNILNSL SRAYGQMILK 301: SGFFHADPHP GNILICKGQE VALLDYGQVK ELPNKLRLGY ANLVIAMADN NASRVSQSFW EMGLHTVAKC ENEQQELLRL AQTLFDTKMP TGQTVLQPFS 401: DDSSIKKIAV ETFPEELFSV LRTVVLLRGL SVGMGVNYSC AEQWRAMAEE ALLASGRVTR DGKERSRRRA SLRRLRTGS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)