AT5G49880.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:nucleus 1.000 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||||||||||
Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||||||||||
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||||||||||
Description (TAIR10) | protein_coding : mitotic checkpoint family protein | ||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
mitotic checkpoint family protein; CONTAINS InterPro DOMAIN/s: Mitotic checkpoint (InterPro:IPR008672); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
|
||||||||||||||||||||||||||||||||||||||||||||
Coordinates (TAIR10) | chr5:+:20282305..20287775 | ||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 82437.50 Da | ||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 5.30 | ||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.71 | ||||||||||||||||||||||||||||||||||||||||||||
Length | 726 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MILRTPQPKR LRSDAGESPF PTGATGSGNQ LIIYEDSPLP APAPLQTSHD HSADQHLCTY QCRQMVKADV LDALSTAEKQ VEESKTKLQT LNANFTEADA 101: ERKHFRDKFL YSEQELAAAK AREKMLQEQL LMEINNSQER YTKELQSCHE LEVKLQNEMN LRKKAESSAA TAEEKAKLLE DKLTQLSGSV DREKKRLNND 201: IAQLGKEAKL SVARIGADLE RMQCRAQNAE TESNLLRSQL EHLKLIFDEC LQEKTEVDKK LSSFTSEAAS SSDNSVLVKH LQEELKRYEA EVREARKLKS 301: RHLDAELLNV NLLEEQSRRE RAESELSKFH DLQLSMEKLE NELSSWKSLL NDIPGVSCPD DIVMRFSVLQ NEVVQSTMKI GEASTRIKQL EETLEAIQLG 401: RQNAVSEAAL AKEKSEALKT DVKRIEVMLT LVTEEKEQLK AVVNELRKSN SEGSVSGAAD GALIQGFESS LAKKENYIKD LEQDLNQLKD VNNRQRTEIE 501: LLNEKLVDEA RRNKSLERDS DRLRSEISLL ESKLGHGDYS AANTRVLRMV NTLGVENEAK QTIEALQAEL QKTKERLQAV EELKSQSGDA GKLVDSHITG 601: KIAQLKEQNA TLEKREERYK TVFADRISVF RRACCELFGY KIVMDEHQRP NGIPVTRFTL QSIYAQSDDE KLEFEYESGN TSILNNEYAS QGDIAKQIEI 701: FIRKFNSIPA FTANLTMESF NRRTLY |
||||||||||||||||||||||||||||||||||||||||||||
See Also |
|
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)