AT5G49650.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 ASURE: cytosol What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : xylulose kinase-2 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a cytosolic protein capable of phosphorylating xylulose and deoxy-xylulose. It most likely plays a role in producing precursors for isoprenoid biosynthesis. | ||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
xylulose kinase-2 (XK-2); FUNCTIONS IN: xylulokinase activity; INVOLVED IN: xylulose metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate kinase, FGGY (InterPro:IPR000577), Carbohydrate kinase, FGGY, N-terminal (InterPro:IPR018484), Carbohydrate kinase, FGGY, C-terminal (InterPro:IPR018485); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:20152898..20155574 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 61298.10 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.19 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.21 | ||||||||||||||||||||||||||||||||||||||||
| Length | 558 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MADLSLPPDS LFLGFDSSTQ SMKATVLDSN LNIIKTELVH FDSDLPQYKT KDGVYRDTTV NGRIVSPTLM WVEAFDLILQ KLSNANFDFA KVIAVSGSGQ 101: QHGSVYWSKG SSEVLRSLDS KRSLKEQLEN AFSVKESPIW MDSSTTLQCK EIENAVGGAM ELSKITGSRA YERFTGPQIR KLFMTQGEVY KSTERISLVS 201: SFMASLLVGD YACIDETDAA GMNLMDIEKR CWSKAALEAT ATGLEEKLGK LAPAYATAGS ISQYFVQRFG FEKNCVVVQW SGDNPNSLAG LTLSTPGDLA 301: ISLGTSDTVF GITKELQPSL EGHVLPNPVD PESYMVMLVY KNASLTREEI RDRCAEGSWD VFNKYLQQTQ PLNNGKLGFY YTENEILPPL PVGSHRYILE 401: NFSGESLEGV KEQEVGEFDP PSEVRALIEG QFLSKRAHTE RFGMPSPPLR IIATGGASAN ENILSLISAI FGCDVYTVQR PDSASLGAAL RAAHGWLCNK 501: KGSFVPISNL YEGKLETTSL NCKLKVKAGD ANIASTYGLL MKKRMEIENK LVEKLGHF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)