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AT5G49450.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : basic leucine-zipper 1
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
basic leucine-zipper 1 (bZIP1); FUNCTIONS IN: DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: anther dehiscence, regulation of transcription, DNA-dependent; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: male gametophyte, anther, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: G-box binding factor 6 (TAIR:AT4G34590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioGrid:20251eggNOG:ENOG410JQTFeggNOG:ENOG41115TYEMBL:AB023034EMBL:AF400618EMBL:AY088207EMBL:AY136307
EMBL:BT000400EMBL:CP002688EnsemblPlants:AT5G49450EnsemblPlants:AT5G49450.1entrez:835005GeneID:835005Genevisible:Q9FGX2
GO:GO:0003700GO:GO:0005634GO:GO:0006351GO:GO:0006521GO:GO:0006970GO:GO:0009267GO:GO:0009617
GO:GO:0009651GO:GO:0009901GO:GO:0010182GO:GO:0043565GO:GO:0044212GO:GO:0045893GO:GO:0046982
GO:GO:0071333Gramene:AT5G49450.1hmmpanther:PTHR22952hmmpanther:PTHR22952:SF47HOGENOM:HOG000237945InParanoid:Q9FGX2IntAct:Q9FGX2
InterPro:IPR004827KEGG:ath:AT5G49450ncoils:CoilOMA:LENMIATPaxDb:Q9FGX2Pfam:PF07716Pfam:Q9FGX2
Pfscan:PS50217PhylomeDB:Q9FGX2PRIDE:Q9FGX2PRO:PR:Q9FGX2PROSITE:PS00036PROSITE:PS50217ProteinModelPortal:Q9FGX2
Proteomes:UP000006548RefSeq:NP_199756.1scanprosite:PS00036SMART:SM00338SMR:Q9FGX2STRING:3702.AT5G49450.1SUPFAM:SSF57959
TAIR:AT5G49450tair10-symbols:AtbZIP1tair10-symbols:bZIP1UniGene:At.26573UniProt:Q9FGX2
Coordinates (TAIR10) chr5:+:20052145..20052582
Molecular Weight (calculated) 16225.20 Da
IEP (calculated) 9.71
GRAVY (calculated) -0.88
Length 145 amino acids
Sequence (TAIR10)
(BLAST)
001: MANAEKTSSG SDIDEKKRKR KLSNRESARR SRLKKQKLME DTIHEISSLE RRIKENSERC RAVKQRLDSV ETENAGLRSE KIWLSSYVSD LENMIATTSL
101: TLTQSGGGDC VDDQNANAGI AVGDCRRTPW KLSCGSLQPM ASFKT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)