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AT5G49210.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 3675 Blast hits to 2315 proteins in 312 species: Archae - 2; Bacteria - 342; Metazoa - 1190; Fungi - 281; Plants - 114; Viruses - 4; Other Eukaryotes - 1742 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J1A5eggNOG:ENOG410YPNREMBL:AF411800EMBL:AY097387EMBL:CP002688EnsemblPlants:AT5G49210EnsemblPlants:AT5G49210.1
EnsemblPlants:AT5G49210.2entrez:834980GeneID:834980Gramene:AT5G49210.1Gramene:AT5G49210.2hmmpanther:PTHR36402IntAct:Q945P2
KEGG:ath:AT5G49210ncoils:CoilOMA:IGSWEAPPhylomeDB:Q945P2Proteomes:UP000006548RefSeq:NP_568707.1RefSeq:NP_851158.1
STRING:3702.AT5G49210.1TAIR:AT5G49210UniGene:At.8599UniProt:Q945P2
Coordinates (TAIR10) chr5:+:19950093..19951464
Molecular Weight (calculated) 23505.20 Da
IEP (calculated) 9.88
GRAVY (calculated) -1.02
Length 195 amino acids
Sequence (TAIR10)
(BLAST)
001: MAFCNKLSRF VRRQSENASM IGSLRSFSAD ATHHRFHQET HNFLEPEYYI GSWEAPSDPK DAERKLAQLR RDYAKKVRVY RKEYIHEIEM LRVEKQRKDE
101: ARLLAERAAN EERRLLKAEA AKVRAEERKI ADEEFRQTLI KERAEKLEMW KMMGQKREEK IKEREKLLRE QSSLWIEQKE LERKITEALV DNVVL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)