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AT5G48380.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Predictors External Curations
AmiGO : plasma membrane 19616764
SwissProt : plasma membrane 16381842
TAIR : plasma membrane 14506206
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26781341 (2016): plasma membrane
  • PMID:25641898 (2015): plasma membrane
  • PMID:24134884 (2013): cytoskeleton microtubules
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:22923678 (2012): plasma membrane
  • PMID:22215637 (2012): plasma membrane
  • PMID:21433285 (2011): plasma membrane
  • PMID:20843791 (2010): plasma membrane
  • PMID:17644812 (2007): plasma membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:14506206 (2003): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : BAK1-interacting receptor-like kinase 1
Curator
Summary (TAIR10)
Encodes a BAK1-interacting receptor-like kinase named BIR1. Negatively regulates multiple plant resistance signaling pathways, one of which is the SOBIR1(AT2G31880)-dependent pathway.
Computational
Description (TAIR10)
BAK1-interacting receptor-like kinase 1 (BIR1); FUNCTIONS IN: protein kinase activity; INVOLVED IN: negative regulation of defense response; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G28450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G48380-MONOMERBioGrid:20138eggNOG:COG0515eggNOG:ENOG410IIJEEMBL:AB020745EMBL:AF083807EMBL:AF367312
EMBL:AY062559EMBL:AY074386EMBL:CP002688EMBL:FJ708793EnsemblPlants:AT5G48380EnsemblPlants:AT5G48380.1entrez:834892
Gene3D:2.60.120.200Gene3D:3.80.10.10GeneID:834892Genevisible:Q9ASS4GO:GO:0004672GO:GO:0005524GO:GO:0005886
GO:GO:0009506GO:GO:0016021GO:GO:0016301GO:GO:0031348GO:GO:0033612GO:GO:0042742GO:GO:0060548
Gramene:AT5G48380.1hmmpanther:PTHR27000hmmpanther:PTHR27000:SF53HOGENOM:HOG000116554InParanoid:Q9ASS4IntAct:Q9ASS4InterPro:IPR000719
InterPro:IPR001245InterPro:IPR011009InterPro:IPR013210InterPro:IPR013320InterPro:IPR032675KEGG:ath:AT5G48380OMA:GRSGTMY
PaxDb:Q9ASS4Pfam:PF07714Pfam:PF08263Pfam:Q9ASS4Pfscan:PS50011PhylomeDB:Q9ASS4PRIDE:Q9ASS4
PRO:PR:Q9ASS4PROSITE:PS50011ProteinModelPortal:Q9ASS4Proteomes:UP000006548RefSeq:NP_568696.1SMR:Q9ASS4STRING:3702.AT5G48380.1
SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT5G48380tair10-symbols:BIR1TMHMM:TMhelixUniGene:At.27413UniProt:Q9ASS4
Coordinates (TAIR10) chr5:-:19604584..19606532
Molecular Weight (calculated) 69145.80 Da
IEP (calculated) 7.33
GRAVY (calculated) -0.07
Length 620 amino acids
Sequence (TAIR10)
(BLAST)
001: MMMGRLVFVI WLYNCLCLLL LSSLVDADQA NIDCLRTFKS QVEDPNRYLS TWVFGNETAG YICKFSGVTC WHDDENRVLS IKLSGYGLRG VFPPAVKLCA
101: DLTGLDLSRN NFSGPLPANI STLIPLVTIL DLSYNSFSGE IPMLISNITF LNTLMLQHNQ FTGTLPPQLA QLGRLKTFSV SDNRLVGPIP NFNQTLQFKQ
201: ELFANNLDLC GKPLDDCKSA SSSRGKVVII AAVGGLTAAA LVVGVVLFFY FRKLGAVRKK QDDPEGNRWA KSLKGQKGVK VFMFKKSVSK MKLSDLMKAT
301: EEFKKDNIIA TGRTGTMYKG RLEDGSLLMI KRLQDSQRSE KEFDAEMKTL GSVKNRNLVP LLGYCVANKE RLLMYEYMAN GYLYDQLHPA DEESFKPLDW
401: PSRLKIAIGT AKGLAWLHHS CNPRIIHRNI SSKCILLTAE FEPKISDFGL ARLMNPIDTH LSTFVNGEFG DFGYVAPEYS RTMVATPKGD VYSFGVVLLE
501: LVTGQKATSV TKVSEEKAEE ENFKGNLVEW ITKLSSESKL QEAIDRSLLG NGVDDEIFKV LKVACNCVLP EIAKQRPTMF EVYQLLRAIG ESYNFTADDD
601: ILIPSESGEG DFIEELIVAR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)