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AT5G48230.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
peroxisome 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : acetoacetyl-CoA thiolase 2
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
acetoacetyl-CoA thiolase 2 (ACAT2); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, acetyl-CoA C-acetyltransferase activity, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: peroxisome, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Thiolase, acyl-enzyme intermediate active site (InterPro:IPR020615); BEST Arabidopsis thaliana protein match is: Thiolase family protein (TAIR:AT5G47720.4); Has 23880 Blast hits to 23851 proteins in 2352 species: Archae - 481; Bacteria - 15387; Metazoa - 998; Fungi - 680; Plants - 247; Viruses - 0; Other Eukaryotes - 6087 (source: NCBI BLink).
Protein Annotations
EnsemblPlants:AT5G48230EnsemblPlants:AT5G48230.1entrez:834876gramene_pathway:2.3.1.9gramene_pathway:ILEUDEG-PWYgramene_pathway:LYSINE-DEG2-PWYgramene_pathway:PWY-922
gramene_plant_reactome:1119615gramene_plant_reactome:6875138hmmpanther:PTHR18919hmmpanther:PTHR18919:SF105Pfam:PF00108Pfam:PF02803scanprosite:PS00098
scanprosite:PS00099scanprosite:PS00737tair10-symbols:ACAT2tair10-symbols:EMB1276TIGRfam:TIGR01930
Coordinates (TAIR10) chr5:-:19552570..19555030
Molecular Weight (calculated) 40879.40 Da
IEP (calculated) 5.85
GRAVY (calculated) 0.20
Length 398 amino acids
Sequence (TAIR10)
(BLAST)
001: MNVDESDVCI VGVARTPMGG FLGSLSSLPA TKLGSLAIAA ALKRANVDPA LVQEVVFGNV LSANLGQAPA RQAALGAGIP NSVICTTVNK VCASGMKAVM
101: IAAQSIQLGI NDVVVAGGME SMSNTPKYLA EARKGSRFGH DSLVDGMLKD GLWDVYNDCG MGSCAELCAE KFQITREQQD DYAVQSFERG IAAQEAGAFT
201: WEIVPVEVSG GRGRPSTIVD KDEGLGKFDA AKLRKLRPSF KENGGTVTAG NASSISDGAA ALVLVSGEKA LQLGLLVLAK IKGYGDAAQE PEFFTTAPAL
301: AIPKAIAHAG LESSQVDYYE INEAFAVVAL ANQKLLGIAP EKVNVNGGAV SLGHPLGCSG ARILITLLGI LKKRNGKYGV GGVCNGGGGA SALVLELL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)