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AT5G47455.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17310.1); Has 147 Blast hits to 147 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 147; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J68IeggNOG:ENOG410ZFWDEMBL:AK227580EMBL:BT006383
EMBL:CP002688EnsemblPlants:AT5G47455EnsemblPlants:AT5G47455.1EnsemblPlants:AT5G47455.6
EnsemblPlants:AT5G47455.7entrez:834795ExpressionAtlas:Q84MD3GeneID:834795
Gramene:AT5G47455.1Gramene:AT5G47455.6Gramene:AT5G47455.7hmmpanther:PTHR33156
hmmpanther:PTHR33156:SF9HOGENOM:HOG000237694KEGG:ath:AT5G47455PhylomeDB:Q84MD3
Proteomes:UP000006548RefSeq:NP_001154764.1RefSeq:NP_851146.1RefSeq:NP_974898.1
STRING:3702.AT5G47455.4TAIR:AT5G47455UniGene:At.66689UniProt:Q84MD3
Coordinates (TAIR10) chr5:+:19250805..19251665
Molecular Weight (calculated) 10357.30 Da
IEP (calculated) 12.51
GRAVY (calculated) -0.04
Length 100 amino acids
Sequence (TAIR10)
(BLAST)
1: MASRFMSRSS VSSFKSAIRS SFRNSPIGTG SSPAAASSAG FRIPSKPAAS PLPRFSFSRC PSELGCVQSL LPLHSTVAAA RLTSCLSTTS RSSRALTQGT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)