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AT5G47120.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
endoplasmic reticulum 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:23782494 (2013): endoplasmic reticulum
  • PMID:23782494 (2013): nucleus nuclear envelope
  • PMID:19054355 (2009): endoplasmic reticulum
  • PMID:15610358 (2005): cytosol
  • PMID:15604726 (2004): endoplasmic reticulum
  • PMID:11593047 (2001): endoplasmic reticulum
  • PMID:11593047 (2001): nucleus
  • PMID:22923678 (2012): endoplasmic reticulum
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : BAX inhibitor 1
Curator
Summary (TAIR10)
Encodes BI-1, a homolog of mammalian Bax inhibitor 1. Functions as an attenuator of biotic and abiotic types of cell death. Bax-induced cell death can be downregulated by ectopically expressing AtBI in planta.
Computational
Description (TAIR10)
BAX inhibitor 1 (BI1); CONTAINS InterPro DOMAIN/s: Inhibitor of apoptosis-promoting Bax1 related (InterPro:IPR006214), Bax inhibitor 1, conserved site (InterPro:IPR006213); BEST Arabidopsis thaliana protein match is: Bax inhibitor-1 family protein (TAIR:AT4G17580.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioGrid:20006eggNOG:ENOG4111GCTeggNOG:KOG1629EMBL:AB025609EMBL:AB025927EMBL:AF208124EMBL:AY091134
EMBL:AY114059EMBL:CP002688EnsemblPlants:AT5G47120EnsemblPlants:AT5G47120.1entrez:834758GeneID:834758Genevisible:Q9LD45
GO:GO:0000038GO:GO:0005635GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0006915GO:GO:0006983
GO:GO:0009414GO:GO:0016021GO:GO:0043066GO:GO:0043069Gramene:AT5G47120.1hmmpanther:PTHR23291hmmpanther:PTHR23291:SF34
HOGENOM:HOG000238748InParanoid:Q9LD45IntAct:Q9LD45InterPro:IPR006213InterPro:IPR006214iPTMnet:Q9LD45KEGG:ath:AT5G47120
OMA:WLAMTPHPANTHER:PTHR23291PaxDb:Q9LD45Pfam:PF01027Pfam:Q9LD45PhylomeDB:Q9LD45PIR:T52449
PRIDE:Q9LD45PRO:PR:Q9LD45PROSITE:PS01243ProteinModelPortal:Q9LD45Proteomes:UP000006548RefSeq:NP_199523.1scanprosite:PS01243
STRING:3702.AT5G47120.1TAIR:AT5G47120tair10-symbols:ATBI-1tair10-symbols:ATBI1tair10-symbols:BI-1tair10-symbols:BI1TMHMM:TMhelix
UniGene:At.24669UniProt:Q9LD45
Coordinates (TAIR10) chr5:+:19136071..19137585
Molecular Weight (calculated) 27485.00 Da
IEP (calculated) 8.92
GRAVY (calculated) 0.52
Length 247 amino acids
Sequence (TAIR10)
(BLAST)
001: MDAFSSFFDS QPGSRSWSYD SLKNFRQISP AVQNHLKRVY LTLCCALVAS AFGAYLHVLW NIGGILTTIG CIGTMIWLLS CPPYEHQKRL SLLFVSAVLE
101: GASVGPLIKV AIDVDPSILI TAFVGTAIAF VCFSAAAMLA RRREYLYLGG LLSSGLSMLM WLQFASSIFG GSASIFKFEL YFGLLIFVGY MVVDTQEIIE
201: KAHLGDMDYV KHSLTLFTDF VAVFVRILII MLKNSADKEE KKKKRRN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)