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AT5G47100.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : calcineurin B-like protein 9
Curator
Summary (TAIR10)
member of AtCBLs (Calcineurin B-like Calcium Sensor Proteins. CBL9 interacts with and targets CIPK23 to the plasma membrane in vivo.
Computational
Description (TAIR10)
calcineurin B-like protein 9 (CBL9); FUNCTIONS IN: calcium ion binding; INVOLVED IN: response to water deprivation, N-terminal protein myristoylation, potassium ion import, stomatal movement, response to stress; LOCATED IN: plasma membrane, protein serine/threonine phosphatase complex, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), Recoverin (InterPro:IPR001125), EF-HAND 2 (InterPro:IPR018249), Calcineurin B protein (InterPro:IPR015757), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: calcineurin B-like protein 1 (TAIR:AT4G17615.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioGrid:20004DIP:DIP-33308NeggNOG:COG5126eggNOG:KOG0034EMBL:AB025609EMBL:AB060590EMBL:AF411958
EMBL:BT002995EMBL:BT004458EMBL:CP002688EnsemblPlants:AT5G47100EnsemblPlants:AT5G47100.1entrez:834756Gene3D:1.10.238.10
GeneID:834756Genevisible:Q9LTB8GO:GO:0005509GO:GO:0005737GO:GO:0005886GO:GO:0009414GO:GO:0009738
GO:GO:0009860Gramene:AT5G47100.1hmmpanther:PTHR23056hmmpanther:PTHR23056:SF41HOGENOM:HOG000233019InParanoid:Q9LTB8IntAct:Q9LTB8
InterPro:IPR002048InterPro:IPR011992InterPro:IPR018247iPTMnet:Q9LTB8KEGG:ath:AT5G47100KO:K06268OMA:YEMIETI
PaxDb:Q9LTB8Pfam:PF13202Pfam:PF13499Pfam:Q9LTB8Pfscan:PS50222PhylomeDB:Q9LTB8PRIDE:Q9LTB8
PRO:PR:Q9LTB8PROSITE:PS00018PROSITE:PS50222ProteinModelPortal:Q9LTB8Proteomes:UP000006548RefSeq:NP_199521.1scanprosite:PS00018
SMART:SM00054SMR:Q9LTB8STRING:3702.AT5G47100.1SUPFAM:SSF47473SwissPalm:Q9LTB8TAIR:AT5G47100tair10-symbols:ATCBL9
tair10-symbols:CBL9UniGene:At.9739UniProt:Q9LTB8
Coordinates (TAIR10) chr5:-:19129896..19131727
Molecular Weight (calculated) 24533.10 Da
IEP (calculated) 4.33
GRAVY (calculated) -0.21
Length 213 amino acids
Sequence (TAIR10)
(BLAST)
001: MGCFHSTAAR EFPDHENPVK LASETAFSVS EVEALYELFK SISSSVVDDG LINKEEFQLA LFKNRKKENL FANRIFDLFD VKRKGVIDFG DFVRSLNVFH
101: PNASLEEKTD FTFRLYDMDC TGFIERQEVK QMLIALLCES EMKLADDTIE MILDQTFEDA DVDRDGKIDK TEWSNFVIKN PSLLKIMTLP YLRDITTTFP
201: SFVFNSEVDE IAT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)