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AT5G46620.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.871
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JXQ0eggNOG:ENOG410Z0Z3EMBL:AK117370EMBL:BT028907EMBL:CP002688EnsemblPlants:AT5G46620EnsemblPlants:AT5G46620.1
entrez:834705GeneID:834705Gramene:AT5G46620.1hmmpanther:PTHR35750hmmpanther:PTHR35750:SF1HOGENOM:HOG000005907KEGG:ath:AT5G46620
OMA:PRKCKTKPhylomeDB:Q8GYV3Proteomes:UP000006548RefSeq:NP_199474.1TAIR:AT5G46620UniGene:At.29941UniProt:Q8GYV3
Coordinates (TAIR10) chr5:-:18917850..18919128
Molecular Weight (calculated) 15992.90 Da
IEP (calculated) 7.44
GRAVY (calculated) -0.72
Length 149 amino acids
Sequence (TAIR10)
(BLAST)
001: MGFLKKLTGI LGFGHNDGGG GHGAVRDEDG DGGDNNTGTV SGDGDKRREE NQTRFRETGP RKGFGVPVQV AVERSNPGPI LQPCAALDGG VQGLRWYSMR
101: LKIDEDGDVA DEFLEDQNCK TLPRKCKTKA AKVRGLVISS DGKLQPLMH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)