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AT5G46450.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.801
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Disease resistance protein (TIR-NBS-LRR class) family
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G46470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JN8QeggNOG:ENOG410Y9R7EMBL:AB019223EMBL:CP002688EnsemblPlants:AT5G46450EnsemblPlants:AT5G46450.1entrez:834688
Gene3D:3.40.50.10140Gene3D:3.40.50.300Gene3D:3.80.10.10GeneID:834688GO:GO:0005524GO:GO:0007165GO:GO:0043531
Gramene:AT5G46450.1hmmpanther:PTHR11017hmmpanther:PTHR11017:SF20HOGENOM:HOG000064702InterPro:IPR000157InterPro:IPR002182InterPro:IPR003593
InterPro:IPR011713InterPro:IPR011991InterPro:IPR027417InterPro:IPR032675KEGG:ath:AT5G46450ncoils:CoilOMA:MERCENL
Pfam:PF00931Pfam:PF01582Pfam:PF07725Pfscan:PS50104PhylomeDB:Q9FHG0PROSITE:PS50104Proteomes:UP000006548
RefSeq:NP_199457.1SMART:SM00255SMART:SM00382STRING:3702.AT5G46450.1SUPFAM:SSF46785SUPFAM:SSF52058SUPFAM:SSF52200
SUPFAM:SSF52540TAIR:AT5G46450UniGene:At.29956UniProt:Q9FHG0
Coordinates (TAIR10) chr5:+:18835618..18839546
Molecular Weight (calculated) 128011.00 Da
IEP (calculated) 4.79
GRAVY (calculated) -0.26
Length 1123 amino acids
Sequence (TAIR10)
(BLAST)
0001: MASSSSSSRN WSYDVFPSFS GEDVRKTFLS HFLRELERKS IITFKDNEME RSQSIAPELV EAIKDSRIAV IVFSKNYASS SWCLNELLEI MRCNKYLGQQ
0101: VIPVFYYLDP SHLRKQSGEF GEAFKKTCQN QTEEVKNQWK QALTDVSNIL GYHSKNCNSE ATMIEEISSH ILGKLSLTPS NDFEEFVGIK DHIEKVRLLL
0201: HLESDEVRMV GIWGTSGIGK TTIARALFSN LSSQFQSSVY IDRAFISKSM EGYGRANPDD YNMKLRLREN FLFEILGKKN MKIGAMEERL KHQKVLIIID
0301: DLDDQDVLDA LVGRTQWFGS GSRIIVVTKN KHFLRAHGID HVYEACLPSE ELALEMFCRY AFRKNSPPDG FMELSSEVAL RAGNLPLGLK VLGSYLRGRD
0401: IEDWMDMMPR LQNDLDGKIE KTLRVSYDGL NNKKDEAIFR HIACLFNGEK VNDIKLLLAE SDLDVNIGLK NLVDKSLIFV REDTIEMHRL LQDMGKEIVR
0501: AQSNEPGERE FLVDSKHIYD VLEDNTGTKK VLGIALDINE TDGLYIHESA FKGMRNLLFL NFYTKQKKDV TWHLSEGFDH LPPKLRLLSW EKYPLRCMPS
0601: NFRPENLVKL QMCESKLEKL WDGVHSLTGL RNMDLRGSEN LKEIPDLSLA TNLKKLDVSN CTSLVELSST IQNLNQLEEL QMERCENLEN LPIGINLESL
0701: YCLNLNGCSK LRSFPDISTT ISELYLSETA IEEFPTELHL ENLYYLGLYD MKSEKLWKRV QPLTPLMTML SPSLTKLFLS DIPSLVELPS SFQNLHNLEH
0801: LNIARCTNLE TLPTGVNLEL LEQLDFSGCS RLRSFPDIST NIFSLVLDGT GIEEVPWWIE DFYRLSFLSM IGCNNLQGVS LNISKLEKLE TVDFSDCEAL
0901: SHANWDTIPS AVAMATENIH SKLPVCIKFS NCFNLDHKAV LLQQSIFKQL ILSGGEMFSY FTHRTTGTSL TNIPLLHISP CQPFFRFRAC ALVDTESMDI
1001: GSVFFQVQVS CRFTDRLGNY LDSPYQHEVF AVLEKGSHMV ISDCCFPFNE DNAPLAELIY DHVDIQFHFT QENDELKLIG CGLRLSEADN DLGNEIDGSE
1101: EWEDCNDSGL GSESDNLEAE EDT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)