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AT5G45870.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.997
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : PYR1-like 12
Curator
Summary (TAIR10)
Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.
Computational
Description (TAIR10)
PYR1-like 12 (PYL12); CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: PYR1-like 11 (TAIR:AT5G45860.1); Has 430 Blast hits to 430 proteins in 36 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 426; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioGrid:19876eggNOG:ENOG410IG1PeggNOG:ENOG4111MYFEMBL:AB016870
EMBL:CP002688EnsemblPlants:AT5G45870EnsemblPlants:AT5G45870.1entrez:834627
Gene3D:3.30.530.20GeneID:834627GO:GO:0004864GO:GO:0004872
GO:GO:0005634GO:GO:0005737GO:GO:0005886GO:GO:0009738
GO:GO:0010427GO:GO:0042803GO:GO:0043086GO:GO:0080163
Gramene:AT5G45870.1hmmpanther:PTHR31213hmmpanther:PTHR31213:SF8HOGENOM:HOG000238422
InParanoid:Q9FJ49IntAct:Q9FJ49InterPro:IPR019587InterPro:IPR023393
KEGG:ath:AT5G45870KO:K14496OMA:EMVCKANPaxDb:Q9FJ49
Pfam:PF10604Pfam:Q9FJ49PhylomeDB:Q9FJ49PRO:PR:Q9FJ49
ProteinModelPortal:Q9FJ49Proteomes:UP000006548RefSeq:NP_199399.1SMR:Q9FJ49
STRING:3702.AT5G45870.1SUPFAM:SSF55961TAIR:AT5G45870tair10-symbols:PYL12
tair10-symbols:RCAR6UniGene:At.65642UniProt:Q9FJ49
Coordinates (TAIR10) chr5:-:18606564..18607043
Molecular Weight (calculated) 17634.00 Da
IEP (calculated) 4.64
GRAVY (calculated) -0.15
Length 159 amino acids
Sequence (TAIR10)
(BLAST)
001: MKTSQEQHVC GSTVVQTINA PLPLVWSILR RFDNPKTFKH FVKTCKLRSG DGGEGSVREV TVVSDLPASF SLERLDELDD ESHVMVISII GGDHRLVNYQ
101: SKTTVFVAAE EEKTVVVESY VVDVPEGNTE EETTLFADTI VGCNLRSLAK LSEKMMELT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)