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AT5G45820.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.565
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : CBL-interacting protein kinase 20
Curator
Summary (TAIR10)
Encodes a CBL-interacting serine/threonine protein kinase comprised of an N-terminal kinase catalytic domain similar to SNF1/AMPK and a unique C-terminal regulatory domain.
Computational
Description (TAIR10)
CBL-interacting protein kinase 20 (CIPK20); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SOS3-interacting protein 1 (TAIR:AT5G58380.1); Has 132772 Blast hits to 130743 proteins in 4620 species: Archae - 210; Bacteria - 15587; Metazoa - 48907; Fungi - 13398; Plants - 32037; Viruses - 531; Other Eukaryotes - 22102 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G45820-MONOMERBioGrid:19871EC:2.7.11.1eggNOG:COG0515eggNOG:KOG0583EMBL:AB016870EMBL:AK221510
EMBL:AY035225EMBL:BT028970EMBL:CP002688EnsemblPlants:AT5G45820EnsemblPlants:AT5G45820.1entrez:834622GeneID:834622
Genevisible:Q9FJ54GO:GO:0004674GO:GO:0005524GO:GO:0005829GO:GO:0007165GO:GO:0009737Gramene:AT5G45820.1
hmmpanther:PTHR24347hmmpanther:PTHR24347:SF215HOGENOM:HOG000233016InParanoid:Q9FJ54InterPro:IPR000719InterPro:IPR004041InterPro:IPR008271
InterPro:IPR011009InterPro:IPR017441InterPro:IPR018451InterPro:IPR020636KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:ath:AT5G45820
OMA:FLHEVMAPANTHER:PTHR24347PaxDb:Q9FJ54Pfam:PF00069Pfam:PF03822Pfam:Q9FJ54Pfscan:PS50011
Pfscan:PS50816PhylomeDB:Q9FJ54PRIDE:Q9FJ54PRO:PR:Q9FJ54PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011
PROSITE:PS50816ProteinModelPortal:Q9FJ54Proteomes:UP000006548RefSeq:NP_199394.1scanprosite:PS00107scanprosite:PS00108SMART:SM00220
SMR:Q9FJ54STRING:3702.AT5G45820.1SUPFAM:SSF56112TAIR:AT5G45820tair10-symbols:CIPK20tair10-symbols:PKS18tair10-symbols:SnRK3.6
UniGene:At.7703UniProt:Q9FJ54
Coordinates (TAIR10) chr5:-:18587081..18588400
Molecular Weight (calculated) 50170.60 Da
IEP (calculated) 9.46
GRAVY (calculated) -0.46
Length 439 amino acids
Sequence (TAIR10)
(BLAST)
001: MDKNGIVLMR KYELGRLLGQ GTFAKVYHAR NIKTGESVAI KVIDKQKVAK VGLIDQIKRE ISVMRLVRHP HVVFLHEVMA SKTKIYFAME YVKGGELFDK
101: VSKGKLKENI ARKYFQQLIG AIDYCHSRGV YHRDLKPENL LLDENGDLKI SDFGLSALRE SKQQDGLLHT TCGTPAYVAP EVIGKKGYDG AKADVWSCGV
201: VLYVLLAGFL PFHEQNLVEM YRKITKGEFK CPNWFPPEVK KLLSRILDPN PNSRIKIEKI MENSWFQKGF KKIETPKSPE SHQIDSLISD VHAAFSVKPM
301: SYNAFDLISS LSQGFDLSGL FEKEERSESK FTTKKDAKEI VSKFEEIATS SERFNLTKSD VGVKMEDKRE GRKGHLAIDV EIFEVTNSFH MVEFKKSGGD
401: TMEYKQFCDR ELRPSLKDIV WKWQGNNNNS NNEKIEVIH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)