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AT5G45540.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 0.706
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF594)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF594); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF594 (InterPro:IPR007658); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF594) (TAIR:AT5G45480.1); Has 1285 Blast hits to 857 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1285; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IGXBeggNOG:ENOG410YBQCEMBL:AB018113EMBL:CP002688EnsemblPlants:AT5G45540EnsemblPlants:AT5G45540.1entrez:834590
GeneID:834590GO:GO:0016021Gramene:AT5G45540.1hmmpanther:PTHR31325hmmpanther:PTHR31325:SF1HOGENOM:HOG000240621InterPro:IPR007658
InterPro:IPR025315KEGG:ath:AT5G45540OMA:SEYVHAYPfam:PF04578Pfam:PF13968PhylomeDB:Q9FHI2Proteomes:UP000006548
RefSeq:NP_199367.1STRING:3702.AT5G45540.1TAIR:AT5G45540TMHMM:TMhelixUniGene:At.50909UniProt:Q9FHI2
Coordinates (TAIR10) chr5:-:18458294..18460705
Molecular Weight (calculated) 93237.90 Da
IEP (calculated) 7.44
GRAVY (calculated) -0.17
Length 803 amino acids
Sequence (TAIR10)
(BLAST)
001: MTDMIPPHLR KLWDKWNIRG VIILSLFLQT ILIFFAPSRR RTAKKLFLVL IWSAYLLADW AADYAVGQIS DSQEEEAESN KPSKNRELLA FWSPFLLLHL
101: GGPDTITALA LEDNELWDRH LFSLVCQAVA TVYVILLSIP NRLLTPTLIM FVGGVIKYVE RTAALFSASL DKFKDSMLDD PDPGANYAKL MEEYEARKKM
201: NMPTDVIVVK DPEKGREGNT PVRPDNELTA LQVIQYAYKY FNIFKGLIVD LIFTNQERDE SRKFFDKLTA EEALRIIEVE LGLIYDCLFT KAEILHNWTG
301: AVFRFIALGC LVASLCLFKM NKKDQYDGFD VVLTYALLIC GIALDSIALL MFCVSDWTIA RLRKLKEDLE EKDTLTDRVL NWILDFKTLR WKRSKCSQDG
401: HQVLNRNFMF RRWSEYVHAY NLIGFCLGIR PKRIHYTKGK IHSFFHQTVH ILSIDTAIEN ATRGTRQFHN WIGRFLSNLS KRDNSVIRTG LRWFLFFPQL
501: LGLLIYNFLD FFGIKDLVEE IRFTVSDRLT RELWEFIFTE VQQKHRFAED QESAKGISSA RGNWTLLETS SKKKEDGTDH TKLLQYVTEK DYDQSILLWH
601: IATELLYQKP IDKKVTEKEE HSTNREKEEH SNREFSKILS DYMMYLLIVQ PTLMSAVSGI AKIRFRDTCE EAKDFFQRRH VDKSRYVKKN LMKEACRAIL
701: SVNTEIDPMA VKGDRSKSVL FDASVLAKEL MNEGENMWEV VSKVWVELLC YASLHCDSQE HASQLSKGGE LINFVWLLMA HFGLGDQFQI NRDDARAKLI
801: VAN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)