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AT5G45410.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.998
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G25030.2); Has 124 Blast hits to 124 proteins in 34 species: Archae - 2; Bacteria - 31; Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IHRGeggNOG:ENOG410XX7QEMBL:AB018113EMBL:AK317328
EMBL:BT002755EMBL:CP002688EnsemblPlants:AT5G45410EnsemblPlants:AT5G45410.1
EnsemblPlants:AT5G45410.2EnsemblPlants:AT5G45410.3entrez:834577GeneID:834577
GO:GO:0016021Gramene:AT5G45410.1Gramene:AT5G45410.2Gramene:AT5G45410.3
hmmpanther:PTHR31033hmmpanther:PTHR31033:SF7KEGG:ath:AT5G45410OMA:QEYFSGH
PhylomeDB:Q9FHJ5Proteomes:UP000006548RefSeq:NP_001078717.1RefSeq:NP_199354.3
RefSeq:NP_680396.1TAIR:AT5G45410TMHMM:TMhelixUniGene:At.22622
UniProt:Q9FHJ5
Coordinates (TAIR10) chr5:-:18402071..18403282
Molecular Weight (calculated) 36468.50 Da
IEP (calculated) 10.31
GRAVY (calculated) -0.10
Length 342 amino acids
Sequence (TAIR10)
(BLAST)
001: MDQECPFAAE SIIQKCPFLR NINKPTNLSF SSLSFPIPVQ GGKGPIFEDG PGFDSAFKLF HGKDGIVPLS GFADDSEDEA GRRALQFNPL AGKVATISLS
101: AFGPGGPFGF GPFSEKWKKQ QKKPKPSKNQ QSGDSSKHEA VGDEWLKTGN CPIAKSFRAA SKVMPLISKA LTLPPGMKYR CPAPIVAARA ALSKTALVKS
201: LRPQPLPEKM LAIALMGMAA NVPLGVWREH TKKFSPAWFL AVHAAVPFIA MLRKSVLMPK TAMALTIGAS ILGQVIGSRA ERYRLKAVAE KMVPVTAMVS
301: GYNQSPGDSG ISGGHCGIGE GVKQVYYNVN IGESAKSTGL CY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)