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AT5G45380.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : solute:sodium symporters;urea transmembrane transporters
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
DEGRADATION OF UREA 3 (DUR3); CONTAINS InterPro DOMAIN/s: Sodium/solute symporter, subgroup (InterPro:IPR019900), Sodium/solute symporter (InterPro:IPR001734); Has 9388 Blast hits to 9377 proteins in 1702 species: Archae - 173; Bacteria - 6389; Metazoa - 719; Fungi - 340; Plants - 51; Viruses - 0; Other Eukaryotes - 1716 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0591eggNOG:KOG2348EMBL:AB018113EMBL:CP002688
EnsemblPlants:AT5G45380EnsemblPlants:AT5G45380.1entrez:834574GeneID:834574
Genevisible:F4KD71GO:GO:0005886GO:GO:0015204GO:GO:0015293
GO:GO:0016021GO:GO:0071918Gramene:AT5G45380.1hmmpanther:PTHR11819
hmmpanther:PTHR11819:SF94HOGENOM:HOG000106394InParanoid:F4KD71InterPro:IPR001734
InterPro:IPR031155iPTMnet:F4KD71KEGG:ath:AT5G45380ncoils:Coil
OMA:WALKRYQPANTHER:PTHR11819PANTHER:PTHR11819:SF94PaxDb:F4KD71
Pfam:F4KD71Pfam:PF00474Pfscan:PS50283PRIDE:F4KD71
PRO:PR:F4KD71PROSITE:PS50283ProteinModelPortal:F4KD71Proteomes:UP000006548
RefSeq:NP_199351.2STRING:3702.AT5G45380.1TAIR:AT5G45380tair10-symbols:ATDUR3
tair10-symbols:DUR3TCDB:2.A.21.6.2TIGRfam:TIGR00813TIGRFAMs:TIGR00813
TMHMM:TMhelixUniGene:At.30015UniProt:F4KD71
Coordinates (TAIR10) chr5:+:18391337..18395696
Molecular Weight (calculated) 75917.10 Da
IEP (calculated) 8.88
GRAVY (calculated) 0.54
Length 704 amino acids
Sequence (TAIR10)
(BLAST)
001: MATCPPFDFS TKYYDGDGGC QRQSSFFGGT TVLDQGVGYA VILGFGAFFA VFTSFLVWLE KRYVGARHTS EWFNTAGRNV KTGLIASVIV SQWTWAATIL
101: QSSNVAWQYG VSGPFWYASG ATIQVLLFGV MAIEIKRKAP NAHTVCEIVK ARWGTATHIV FLVFCLATNV VVTAMLLLGG SAVVNALTGV NLYAASFLIP
201: LGVVVYTLAG GLKATFLASY VHSVIVHVAL VVFVFLVYTS SKELGSPSVV YDRLKDMVAK SRSCTEPLSH HGQACGPVDG NFRGSYLTML SSGGAVFGLI
301: NIVGNFGTVF VDNGYWVSAI AARPSSTHKG YLLGGLVWFA VPFSLATSLG LGALALDLPI SKDEADRGLV PPATAIALMG KSGSLLLLTM LFMAVTSAGS
401: SELIAVSSLF TYDIYRTYIN PRATGRQILK ISRCAVLGFG CFMGILAVVL NKAGVSLGWM YLAMGVLIGS AVIPIAFMLL WSKANAFGAI LGATSGCVFG
501: IITWLTTAKT QYGRVDLDST GKNGPMLAGN LVAILTGGLI HAVCSLVRPQ NYDWSTTREI KVVEAYASGD EDVDVPAEEL REEKLRRAKA WIVKWGLVFT
601: ILIVVIWPVL SLPARVFSRG YFWFWAIVAI AWGTIGSIVI IGLPLVESWD TIKSVCMGMF TNDRVMKKLD DLNHRLRALT MAVPEAEKIY LLELEKTKKN
701: DEEG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)