AT5G45370.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:vacuole 0.817 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : nodulin MtN21 /EamA-like transporter family protein | ||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT4G19185.1); Has 7157 Blast hits to 7143 proteins in 1340 species: Archae - 107; Bacteria - 4855; Metazoa - 27; Fungi - 14; Plants - 1223; Viruses - 0; Other Eukaryotes - 931 (source: NCBI BLink). | ||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:18388411..18390282 | ||||||||
| Molecular Weight (calculated) | 38451.50 Da | ||||||||
| IEP (calculated) | 8.55 | ||||||||
| GRAVY (calculated) | 0.70 | ||||||||
| Length | 357 amino acids | ||||||||
| Sequence (TAIR10) (BLAST) |
001: MAAPAILNGG DATERETRMA HSAMTLVQVI NGGYHVVTKV ALNVGVNQLV FCVFRDLLAL SILAPLAFFR ERTIRPPMNR SIFFSLFFLG LAGIFGNQLL 101: FLMGLSYTNP TYAAAIQPSI PVFTFLLAVL MGTEKVNLLK VEGQTKVGGT LVCVSGAIAM ALFRGPALFG VSSFLGLGFD QWHIGVLCLI GNCMCMAAFL 201: AVQAPVLKKY PAYLSVAAYS YFFGASIMIT TAILFVREPK DWSLTQSEVL AVIFAGVFAS ALNYGLLTWS NKILGAALVS LYNPLQPATS AFLSTIFLGS 301: PIYLGSVLGG ILIICGLYMV TWASYREQQT TSAGNEIASS SDVRISEPFI YRDETGK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)