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AT5G45350.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.614
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : proline-rich family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
proline-rich family protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
EMBL:AB018113EMBL:AY052250EMBL:AY060514EMBL:AY086217EMBL:CP002688EMBL:X84315EnsemblPlants:AT5G45350
EnsemblPlants:AT5G45350.1EnsemblPlants:AT5G45350.2entrez:834571GeneID:834571Gramene:AT5G45350.1Gramene:AT5G45350.2KEGG:ath:AT5G45350
OMA:FKHGHGKPIR:S65780Proteomes:UP000006548RefSeq:NP_001078716.1RefSeq:NP_568642.1TAIR:AT5G45350UniGene:At.68
UniGene:At.71049UniProt:Q39115
Coordinates (TAIR10) chr5:-:18382100..18382854
Molecular Weight (calculated) 17830.60 Da
IEP (calculated) 9.74
GRAVY (calculated) -0.90
Length 177 amino acids
Sequence (TAIR10)
(BLAST)
001: MGGDNDNDKD KGFHGYPPAG YPPPGAYPPA GYPQQGYPPP PGAYPPAGYP PGAYPPAPGG YPPAPGYGGY PPAPGYGGYP PAPGHGGYPP AGYPAHHSGH
101: AGGIGGMIAG AAAAYGAHHV AHSSHGPYGH AAYGHGFGHG HGYGYGHGHG KFKHGKHGKF KHGKHGMFGG GKFKKWK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)