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AT5G45070.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.468
plasma membrane 0.455
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26572690 (2016): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : phloem protein 2-A8
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
phloem protein 2-A8 (PP2-A8); FUNCTIONS IN: carbohydrate binding; INVOLVED IN: signal transduction, defense response, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: phloem protein 2-A6 (TAIR:AT5G45080.1); Has 1773 Blast hits to 1692 proteins in 59 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1773; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JUPYeggNOG:ENOG41106NVEMBL:AB019224EMBL:BT010864
EMBL:BT012618EMBL:CP002688EnsemblPlants:AT5G45070EnsemblPlants:AT5G45070.1
entrez:834538Gene3D:3.40.50.10140GeneID:834538Genevisible:Q9FHE9
GO:GO:0007165GO:GO:0030246Gramene:AT5G45070.1hmmpanther:PTHR32009
hmmpanther:PTHR32009:SF5HOGENOM:HOG000015144InParanoid:Q9FHE9InterPro:IPR000157
InterPro:IPR025886KEGG:ath:AT5G45070OMA:NEREFMNPaxDb:Q9FHE9
Pfam:PF01582Pfam:PF14299Pfam:Q9FHE9Pfscan:PS50104
PhylomeDB:Q9FHE9PRIDE:Q9FHE9PRO:PR:Q9FHE9PROSITE:PS50104
ProteinModelPortal:Q9FHE9Proteomes:UP000006548RefSeq:NP_199320.1SMART:SM00255
SMR:Q9FHE9STRING:3702.AT5G45070.1SUPFAM:SSF52200TAIR:AT5G45070
tair10-symbols:AtPP2-A8tair10-symbols:PP2-A8UniGene:At.27585UniProt:Q9FHE9
Coordinates (TAIR10) chr5:-:18187899..18189362
Molecular Weight (calculated) 40108.30 Da
IEP (calculated) 6.95
GRAVY (calculated) -0.30
Length 354 amino acids
Sequence (TAIR10)
(BLAST)
001: MAASSSVRPT PTGPQVFINF RGKDLRNGFL SFLEPAMREA NINVFIDKDE VVGTDLVNLF VRIQESRVAV VIFSKDYTSS EWCLDELAEI KDCINQGGLN
101: AIPIFYKLAP SSVLELKGGF GDTFRVLKEK YKNDPERTQK WQEALESIPK LKGLRLAEKS DRNEREFMNE MILEIQKALW QIAMKGNPKV ESNSKGGFLV
201: PARRLTIAHS DNPEKWTWSA IYDRPHKADI EIATMINTHA LIKISGDFHT RKLIPGKKYE VVFIVSLDDT SLGWKNEVTL TLKVVMSDEA ANVKAKKLCL
301: DEYIGENWVD IPVGDFEAPQ EKEDAKIFFS MYQLLNTERK SGLVVKGFAI RPAQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)