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AT5G45060.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.984
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Disease resistance protein (TIR-NBS-LRR class) family
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G45250.1); Has 23011 Blast hits to 16697 proteins in 710 species: Archae - 20; Bacteria - 1528; Metazoa - 2742; Fungi - 144; Plants - 17776; Viruses - 0; Other Eukaryotes - 801 (source: NCBI BLink).
Protein Annotations
EMBL:AB019224EMBL:CP002688EnsemblPlants:AT5G45060EnsemblPlants:AT5G45060.1entrez:834537Gene3D:3.40.50.10140Gene3D:3.40.50.300
Gene3D:3.80.10.10GeneID:834537GO:GO:0005524GO:GO:0007165GO:GO:0043531Gramene:AT5G45060.1hmmpanther:PTHR11017
hmmpanther:PTHR11017:SF157HOGENOM:HOG000064702InterPro:IPR000157InterPro:IPR002182InterPro:IPR011713InterPro:IPR027417InterPro:IPR032675
KEGG:ath:AT5G45060OMA:PEHGIMEPfam:PF00931Pfam:PF01582Pfam:PF07725Pfscan:PS50104PhylomeDB:Q9FHF0
PROSITE:PS50104Proteomes:UP000006548RefSeq:NP_199319.1SMART:SM00255SMR:Q9FHF0SUPFAM:SSF52058SUPFAM:SSF52200
SUPFAM:SSF52540TAIR:AT5G45060UniGene:At.43446UniProt:Q9FHF0
Coordinates (TAIR10) chr5:+:18182038..18186067
Molecular Weight (calculated) 132408.00 Da
IEP (calculated) 8.20
GRAVY (calculated) -0.34
Length 1165 amino acids
Sequence (TAIR10)
(BLAST)
0001: MAASSSSTGL PPQHQVFINF RGEDLRLGFV SHLVEALEND NIKVFIDNYA DKGEPLETLL TKIHDSKIAL AIFSGKYTES TWCLRELAMI KDCVEKGKLV
0101: AIPIFYKVDP STVRGVRGQF GDAFRDLEER DVIKKKEWKQ ALKWIPGLIG ITVHDKSPES EILNEIVKEV KKVLKKVSLE GSQKVVSVDP SQSIDTLSSV
0201: GGEKDKTFGI KQRLKELEEK LDLVKYKGTR VIGVVGMPGI GKTTLVKELY KTWQGKFSRY ALIDQIRGKS NNFRLECLPT LLLEKLLPEL NNPQLDSIEE
0301: PYKTHKGLLR ERKVLVVLDD VSRREQIYAL LGKYDLHSKH EWIKDGSRII IATNDISSLK GLVHDTYVVR QLNHRDGLQL FRYHAFHYDQ ATPPKVDFMK
0401: LSDEFVHYAR GHPLALKILG RELYEKNMKH WETKLIILAQ SPTTYIGEVV QVSYDELSLA QKDAFLDIAC FRSQDVDYVE SLLVSSDPGS AEAIKALKNK
0501: FLIDTCDGRV EMHDLLYRFS RELDLKASTQ GGSKQRRLWV RQDIINVQQK TMGAANVRGI FLDLSEVKVE TSLDREHFKN MRNLRYLKLY NSHCPHECLT
0601: NNKINMPDGL ELPLKEVRCL HWLKFPLEEL PNDFDPINLV DLKLPYSEIE RLWDGVKDTP VLKWVDLNHS SKLCSLSGLS KAQNLQRLNL EGCTSLESLR
0701: DVNLTSLKTL TLSNCSNFKE FPLIPENLKA LYLDGTSISQ LPDNVGNLKR LVLLNMKDCK VLETIPTCVS ELKTLQKLVL SGCSKLKEFP EINKSSLKIL
0801: LLDGTSIKTM PQLPSVQYLC LSRNDHLIYL PAGINQVSQL TRLDLKYCTK LTYVPELPPT LQYLDAHGCS SLKNVAKPLA RIMSTVQNHY TFNFTNCGNL
0901: EQAAKEEITS YAQRKCQLLS DARKHYNEGS EALFSTCFPG CEVPSWFGHE AVGSLLQRKL LPHWHDKRLS GIALCAVVSF PDSQDQLSCF SVTCTFKIKA
1001: EDKSWVPFTC PVGIWTREGN KKDRIESDHV FIAYISSPHS IRCLEEKNSD KCNFSEASLE FTVTSDTSGI GVFKVLKCGL SLVYENDKNK NSSLEAKYDV
1101: PVEVSFQEPE HGIMEEERYI NKRRSDDRRP KKKRKTKRDD IMIISTVTQT CVPSVNARIE DKVTG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)