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AT5G44990.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.995
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Glutathione S-transferase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Glutathione S-transferase family protein; CONTAINS InterPro DOMAIN/s: Glutathione S-transferase, predicted (InterPro:IPR016639), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutathione S-transferase family protein (TAIR:AT4G19880.1); Has 2474 Blast hits to 2474 proteins in 819 species: Archae - 30; Bacteria - 1545; Metazoa - 25; Fungi - 237; Plants - 128; Viruses - 0; Other Eukaryotes - 509 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G44990-MONOMERBioCyc:ARA:GQT-2560-MONOMERBioCyc:ARA:GQT-2561-MONOMEReggNOG:COG0435eggNOG:KOG2903EMBL:AB010693EMBL:CP002688
EMBL:DQ447039EnsemblPlants:AT5G44990EnsemblPlants:AT5G44990.1EnsemblPlants:AT5G44990.2entrez:834530ExpressionAtlas:Q9FL98Gene3D:1.20.1050.10
Gene3D:3.40.30.10GeneID:834530GO:GO:0016740Gramene:AT5G44990.1Gramene:AT5G44990.2hmmpanther:PTHR32419hmmpanther:PTHR32419:SF6
InterPro:IPR004045InterPro:IPR010987InterPro:IPR012336InterPro:IPR016639KEGG:00480+2.5.1.18KEGG:00980+2.5.1.18KEGG:00982+2.5.1.18
KEGG:ath:AT5G44990OMA:DIASSNYPANTHER:PTHR32419Pfam:PF13409Pfam:PF13410Pfscan:PS50405PhylomeDB:Q9FL98
PIRSF:PIRSF015753PROSITE:PS50405Proteomes:UP000006548RefSeq:NP_001119375.1RefSeq:NP_199312.1SMR:Q9FL98STRING:3702.AT5G44990.1
SUPFAM:SSF47616SUPFAM:SSF52833TAIR:AT5G44990UniGene:At.55374UniProt:Q9FL98
Coordinates (TAIR10) chr5:+:18163370..18164768
Molecular Weight (calculated) 40614.90 Da
IEP (calculated) 5.29
GRAVY (calculated) -0.44
Length 350 amino acids
Sequence (TAIR10)
(BLAST)
001: MATPMENENP NFARTATSFR NFVSKDPDSQ FPAESGRYHL YISYACPWAS RCLAILKLKG LDKAISFSSV QPLWRNTKEN DEHMGWVFPD SDTEVLGAER
101: DHINGAKSVR ELYDIASSNY TGKYTVPVLW DKKLKTIVNN ESSEILRMFN TEFNHVAENP SLDLYPPNLR AIIDETNEWI HDGINNGVYK CGFATNQETY
201: DVEVKRLYEA LDRCEDILRK QRFLCGNTLT ESDIRLFVTV IRFDEAYAVI FKCDKRLVRE YYHLFNYTKD IYQIAGMSST VKMDHIKQNY YGSFPSINPL
301: EIIAHGPNID YSLPHDRHRF SLESDYTRLE LFESASFVCE LKLIEIFDSL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)