AT5G44320.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 ASURE: cytosol What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Eukaryotic translation initiation factor 3 subunit 7 (eIF-3); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 3, subunit 7 (InterPro:IPR007783); BEST Arabidopsis thaliana protein match is: Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) (TAIR:AT4G20980.4); Has 511 Blast hits to 503 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 230; Fungi - 124; Plants - 74; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:17854901..17856667 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 66227.30 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.28 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.65 | ||||||||||||||||||||||||||||||||||||||||
| Length | 588 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVFEAFEVGT VPFNSDGWGP PDASDTSSTS VAAANLLPNV PFASFSRSEK LGRVADWTRA LSNPSARPHT GSKSDPSAIF DFSAFAVDEG FGLTNSGGNA 101: DEDAAFRLVD GKPPPRPKFG PKWRFNQYHN RNQLPQRRDE EVEAKKREAE KDRARRDRLY NNNRNNIHQQ RREAAAFKSS VDIQPEWNML EQIPFSTFSK 201: LSFTVSEPED LLLCGGLESY DRSFDRITPK ADRRLERFKN RSFKVTTSDD LVIRRLAKED KATVFATDAI LAALMCAPRS VYSWDLVIQR VGNKLFFDKR 301: DGSPLDLLSV HETSQEPLPE GKDDINSAHS LGLEAAYINQ NFAQQVLVKN GKRETFDEPI PNVNEGEENA SIAYRYRRWK LDDSMYLVAR CELQSTVDLN 401: NQRSFLTLNA LNEFDPKYSG VDWRQKLETQ RGAVLANELK NNGNKLAKWT AQALLANADM MKIGFVSRVH PRDHFNHVIL SVLGYKPKDF AGQINLNTNN 501: MWGIVKSIVD LCMKLSEGKY VLVKDPSKPQ VRIYEVPADA FDNDYVEEPL PEDEQVQPPE ENTDAGAETN GVSSTNVAVE DKKSEVEA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)