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AT5G43850.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.996
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : RmlC-like cupins superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ARD4; FUNCTIONS IN: acireductone dioxygenase [iron(II)-requiring] activity, metal ion binding; INVOLVED IN: L-methionine salvage from methylthioadenosine, oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acireductone dioxygenase, ARD (InterPro:IPR004313), Cupin, RmlC-type (InterPro:IPR011051), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT4G14710.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G43850-MONOMERBioGrid:19657DNASU:834407EC:1.13.11.54eggNOG:COG1791eggNOG:KOG2107EMBL:AB026651
EMBL:AY086650EMBL:BT000432EMBL:BT006566EMBL:CP002688EnsemblPlants:AT5G43850EnsemblPlants:AT5G43850.1entrez:834407
Gene3D:2.60.120.10GeneID:834407Genevisible:Q8H185GO:GO:0005634GO:GO:0005737GO:GO:0006555GO:GO:0010309
GO:GO:0019509GO:GO:0046872Gramene:AT5G43850.1HAMAP:MF_03154hmmpanther:PTHR23418hmmpanther:PTHR23418:SF4HOGENOM:HOG000201071
InParanoid:Q8H185InterPro:IPR004313InterPro:IPR011051InterPro:IPR014710InterPro:IPR027496KEGG:00270+1.13.11.54KEGG:ath:AT5G43850
KO:K08967OMA:RWIRIWIPANTHER:PTHR23418PaxDb:Q8H185Pfam:PF03079Pfam:Q8H185PhylomeDB:Q8H185
PRIDE:Q8H185PRO:PR:Q8H185ProteinModelPortal:Q8H185Proteomes:UP000006548Reactome:R-ATH-1237112RefSeq:NP_568630.1SMR:Q8H185
STRING:3702.AT5G43850.1SUPFAM:SSF51182TAIR:AT5G43850tair10-symbols:ARD4tair10-symbols:ATARD4UniGene:At.30098UniPathway:UPA00904
UniProt:Q8H185
Coordinates (TAIR10) chr5:-:17627364..17629122
Molecular Weight (calculated) 22449.50 Da
IEP (calculated) 5.35
GRAVY (calculated) -0.75
Length 187 amino acids
Sequence (TAIR10)
(BLAST)
001: MALEAWFMDD SNEDQRLPHH RNPKELVSLD YLAELGVLYW KLNPENYEND SELSKIREDR GYDYMDLLDL CPEKVSNYEE KLKNFFTEHI HKDEEIRYCL
101: AGSGYFDVRD KDDRWIRIWM QPGDLIVLPA GIYHRFTLDA SNYIKLMRLF VGEPVWTPYN RPQEEHPVRK KYIHGLTYKF GETVKAH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)