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AT5G43780.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:24872594 (2014): plastid plastid stroma
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:21531424 (2011): plastid
  • PMID:20423899 (2010): plastid
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:18431481 (2008): plastid
  • PMID:14671022 (2004): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Pseudouridine synthase/archaeosine transglycosylase-like family protein
Curator
Summary (TAIR10)
sulfate adenylyltransferase, ATP sulfurylase
Computational
Description (TAIR10)
APS4; FUNCTIONS IN: sulfate adenylyltransferase (ATP) activity; INVOLVED IN: sulfate assimilation; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Sulphate adenylyltransferase (InterPro:IPR002650); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase/archaeosine transglycosylase-like family protein (TAIR:AT4G14680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:MetaCyc:AT5G43780-MONOMERBioGrid:19650EC:2.7.7.4eggNOG:COG2046eggNOG:KOG0636EMBL:AB026651EMBL:AF110407
EMBL:AJ012586EMBL:AK226204EMBL:AY072193EMBL:AY117323EMBL:CP002688EnsemblPlants:AT5G43780EnsemblPlants:AT5G43780.1
entrez:834400Gene3D:3.40.50.620GeneID:834400Genevisible:Q9S7D8GO:GO:0000103GO:GO:0004020GO:GO:0004781
GO:GO:0005524GO:GO:0005739GO:GO:0009507GO:GO:0009570GO:GO:0016310GO:GO:0070814Gramene:AT5G43780.1
hmmpanther:PTHR11055hmmpanther:PTHR11055:SF24HOGENOM:HOG000069045InParanoid:Q9S7D8InterPro:IPR002650InterPro:IPR014729InterPro:IPR015947
InterPro:IPR024951InterPro:IPR025980KEGG:00230+2.7.7.4KEGG:00261+2.7.7.4KEGG:00450+2.7.7.4KEGG:00920+2.7.7.4KEGG:ath:AT5G43780
KO:K13811OMA:NRVDLEWPaxDb:Q9S7D8Pfam:PF01747Pfam:PF14306Pfam:Q9S7D8PhylomeDB:Q9S7D8
PIR:T52659PRIDE:Q9S7D8PRO:PR:Q9S7D8ProteinModelPortal:Q9S7D8Proteomes:UP000006548RefSeq:NP_199191.1SMR:Q9S7D8
STRING:3702.AT5G43780.1SUPFAM:SSF52374SUPFAM:SSF88697TAIR:AT5G43780tair10-symbols:APS4TIGRfam:TIGR00339TIGRFAMs:TIGR00339
UniGene:At.23710UniGene:At.66691UniPathway:UPA00140UniProt:Q9S7D8
Coordinates (TAIR10) chr5:-:17589631..17591480
Molecular Weight (calculated) 52128.60 Da
IEP (calculated) 9.31
GRAVY (calculated) -0.31
Length 469 amino acids
Sequence (TAIR10)
(BLAST)
001: MASSAAAIVS GSPFRSSPLI HNHHASRYAP GSISVVSLPR QVSRRGLSVK SGLIEPDGGK LMNLVVEESR RRVMKHEAET VPARIKLNRV DLEWVHVLSE
101: GWASPLKGFM RQSEFLQTLH FNSFRLEDGS VVNMSVPIVL AIDDDQKFRI GDSNQVTLVD SVGNPIAILN DIEIYKHPKE ERIARTWGTT ARGLPYAEEA
201: ITKAGNWLIG GDLQVLEPIK YNDGLDRFRL SPSQLREEFI RRGADAVFAF QLRNPVHNGH ALLMTDTRRR LLEMGYKNPV LLLNPLGGFT KADDVPLSWR
301: MRQHEKVLED GVLDPETTVV SIFPSPMLYA GPTEVQWHAK ARINAGANFY IVGRDPAGMG HPTEKRDLYD ADHGKKVLSM APGLERLNIL PFKVAAYDKT
401: QGKMAFFDPS RSQDFLFISG TKMRGLAKKK ENPPDGFMCP SGWKVLVDYY DSLSAETGNG RVSEAVASA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)