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AT5G43430.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : electron transfer flavoprotein beta
Curator
Summary (TAIR10)
Encodes the electron transfer flavoprotein ETF beta, a putative subunit of the mitochondrial electron transfer flavoprotein complex (ETF alpha is At1g50940) in Arabidopsis. Mutations of the ETF beta gene result in accelerated senescence and early death compared to wild-type during extended darkness. Also involved in the catabolism of leucine and chlorophyll degradation pathway activated during darkness-induced carbohydrate deprivation.
Computational
Description (TAIR10)
electron transfer flavoprotein beta (ETFBETA); FUNCTIONS IN: electron carrier activity; INVOLVED IN: chlorophyll catabolic process, leucine catabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (InterPro:IPR014730), Electron transfer flavoprotein, beta-subunit, conserved site (InterPro:IPR000049), Electron transfer flavoprotein, beta subunit (InterPro:IPR012255); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G43430-MONOMEReggNOG:COG2086eggNOG:KOG3180EMBL:AB025638
EMBL:AF446867EMBL:AY045657EMBL:AY084901EMBL:CP002688
EnsemblPlants:AT5G43430EnsemblPlants:AT5G43430.1entrez:834363ExpressionAtlas:Q9LSW8
Gene3D:3.40.50.620GeneID:834363Genevisible:Q9LSW8GO:GO:0005739
GO:GO:0005759GO:GO:0006552GO:GO:0009055GO:GO:0015996
GO:GO:0055114hmmpanther:PTHR21294hmmpanther:PTHR21294:SF8HOGENOM:HOG000247877
InParanoid:Q9LSW8IntAct:Q9LSW8InterPro:IPR000049InterPro:IPR012255
InterPro:IPR014729InterPro:IPR014730iPTMnet:Q9LSW8KEGG:ath:AT5G43430
OMA:NPFCDIAPANTHER:PTHR21294PaxDb:Q9LSW8Pfam:PF01012
Pfam:Q9LSW8PhylomeDB:Q9LSW8PIRSF:PIRSF000090PRIDE:Q9LSW8
PRO:PR:Q9LSW8PROSITE:PS01065ProteinModelPortal:Q9LSW8Proteomes:UP000006548
Reactome:R-ATH-611105RefSeq:NP_001032002.1RefSeq:NP_001078699.1RefSeq:NP_199156.1
scanprosite:PS01065SMART:SM00893SMR:Q9LSW8STRING:3702.AT5G43430.1
SUPFAM:SSF52402TAIR:AT5G43430tair10-symbols:ETFBETAUniGene:At.66670
UniGene:At.7156UniProt:Q9LSW8
Coordinates (TAIR10) chr5:+:17453656..17455111
Molecular Weight (calculated) 27401.70 Da
IEP (calculated) 7.35
GRAVY (calculated) -0.00
Length 251 amino acids
Sequence (TAIR10)
(BLAST)
001: MKILVAVKRV VDYAVKIRVK PDKTGVETQN VKMSMNPFCE IALEEALRIK EAGFAKEVIA VSIGPSQCVD TLRTGLAMGA DRGIHVETNS IFLPLTIAKI
101: LKSLADVENP GLIFLGKQAI DDDCNQTGQM VAALLGWPQA TFASKVVLDK DKNVATVDRE VDGGLETLNV DLPAVITTDL RLNQPRYASL PNIMKAKSKP
201: IKKMTVQDLK VDIKSDIEIL EVTEPPKRKS GVMVSSVDEL IDKLKNEAHV V
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)