AT5G43320.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : casein kinase I-like 8 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
casein kinase I-like 8 (ckl8); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase like 13 (TAIR:AT1G04440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:17386043..17388941 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 54443.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.39 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.64 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 480 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDRVVGGKYK LGRKLGSGSF GELFLGVNVQ TGEEVAVKLE PARARHPQLH YESKLYMLLQ GGTGIPHLKW YGVEGEYNCM VIDLLGPSME DLFNYCSRRF 101: NLKTVLMLAD QMINRVEYMH VRGFLHRDIK PDNFLMGLGR KANQVYIIDY GLAKKYRDLQ THRHIPYREN KNLTGTARYA SVNTHLGIEQ SRRDDLESLG 201: YVLMYFLRGS LPWQGLRAGT KKQKYDKISE KKRLTPVEVL CKSFPPEFTS YFLYVRSLRF EDKPDYPYLK RLFRDLFIRE GYQFDYVFDW TILKYPQFSS 301: GSSSSSKPRS SLRPAMNPPV PIAERPDKPS AGAGQDSRDR FSGALEAYAR RNGSGSGVVQ ADRSRPRTSE NVLASSKDTT PQNYERVERP ISSTRHASSS 401: RKAVVSSVRA TSSADFTENR SSRVVPSNGR SSTAQRTQLV PDPTTRPSSS SFTRAAPSRT ARDITLQSFE LLTIGNGKRK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)