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AT5G43000.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.924
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JTTXeggNOG:ENOG41107IHEMBL:AB008264EMBL:CP002688
EnsemblPlants:AT5G43000EnsemblPlants:AT5G43000.1entrez:834315GeneID:834315
Gramene:AT5G43000.1HOGENOM:HOG000215114KEGG:ath:AT5G43000OMA:VVHVEPL
Proteomes:UP000006548RefSeq:NP_199114.1TAIR:AT5G43000UniGene:At.65628
UniGene:At.73288UniProt:Q9FML9
Coordinates (TAIR10) chr5:-:17246354..17247202
Molecular Weight (calculated) 31442.80 Da
IEP (calculated) 3.98
GRAVY (calculated) 0.10
Length 282 amino acids
Sequence (TAIR10)
(BLAST)
001: MAILTPVIKL VVFRQSLRPH SAIAFLVEFL CFVLELLDKE KDLAKIFGIV CACDTLIFTL LDLIQSLIEE EVKIQRCGRV FWLYTNDGSL YWHTLNAYLL
101: MLCIVHVIGS TISYVSHKHY LVLLPLFAAG LELVPQEAYR VLGPDQESGN SIEPLNGPLN GIELEQGMVV HVEPLQEPLD GIELEQELVP QETNRVLGPD
201: QESQNCIGAL NDPSDGKDQN LQDDIVLDQE SQDCIIAPHQ CPLDGIDLQQ ETVVHVEPLQ DPLDGIELEQ EVAIHVGPND DP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)