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AT5G42650.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:16414959 (2006): plastid plastid envelope
  • PMID:31975158 (2020): plastid
  • PMID:31932409 (2020): plastid
  • PMID:31818904 (2020): mitochondrion
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31520498 (2020): mitochondrion
  • PMID:30962257 (2019): plastid
  • PMID:30135097 (2018): plastid
  • PMID:29967049 (2018): plastid
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27943495 (2017): mitochondrion
  • PMID:27137770 (2016): plastid plastid stroma
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25641898 (2015): plasma membrane
  • PMID:24872594 (2014): plastid plastid thylakoid
  • PMID:24872594 (2014): plastid plastid envelope
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:24124904 (2013): plastid
  • PMID:23851315 (2013): plastid
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:23673981 (2013): plastid
  • PMID:23667806 (2013): plastid plastid thylakoid
  • PMID:23549413 (2013): plastid
  • PMID:23390424 (2013): plastid plastid envelope
  • PMID:22274653 (2012): plastid
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
  • PMID:21531424 (2011): plastid
  • PMID:21311031 (2011): plastid
  • PMID:21311031 (2011): mitochondrion
  • PMID:20423899 (2010): plastid
  • PMID:20061580 (2010): plastid plastid thylakoid
  • PMID:20061580 (2010): plastid plastid envelope
  • PMID:19334764 (2009): plasma membrane
  • PMID:18633119 (2008): plastid plastid thylakoid
  • PMID:18431481 (2008): plastid plastid thylakoid
  • PMID:18431481 (2008): plastid plastid stroma
  • PMID:16461379 (2006): plastid plastid stroma plastoglobules
  • PMID:16414959 (2006): plastid plastid stroma plastoglobules
  • PMID:15322131 (2004): plastid
  • PMID:15028209 (2004): plastid
  • PMID:14671022 (2004): mitochondrion
  • PMID:12938931 (2003): plastid
  • PMID:12766230 (2003): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : allene oxide synthase
Curator
Summary (TAIR10)
Encodes a member of the cytochrome p450 CYP74 gene family that functions as an allene oxide synthase. This enzyme catalyzes dehydration of the hydroperoxide to an unstable allene oxide in the JA biosynthetic pathway. It shows a dual catalytic activity, the major one being a 13-AOS but also expressing a 9-AOS activity.
Computational
Description (TAIR10)
allene oxide synthase (AOS); FUNCTIONS IN: hydro-lyase activity, allene oxide synthase activity, oxygen binding; INVOLVED IN: in 7 processes; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128); BEST Arabidopsis thaliana protein match is: hydroperoxide lyase 1 (TAIR:AT4G15440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:MetaCyc:MONOMER-1582BioGrid:19523BRENDA:4.2.1.92ChEMBL:CHEMBL2268010
EC:4.2.1.92eggNOG:ENOG410IF79eggNOG:ENOG410ZAGUEMBL:AB007647
EMBL:AF172727EMBL:AY062828EMBL:AY065089EMBL:AY128733
EMBL:AY128755EMBL:CP002688EMBL:X92510EMBL:Y12636
EnsemblPlants:AT5G42650EnsemblPlants:AT5G42650.1entrez:834273EvolutionaryTrace:Q96242
Gene3D:1.10.630.10GeneID:834273Genevisible:Q96242GO:GO:0004497
GO:GO:0005506GO:GO:0005739GO:GO:0006952GO:GO:0009507
GO:GO:0009534GO:GO:0009535GO:GO:0009579GO:GO:0009611
GO:GO:0009620GO:GO:0009695GO:GO:0009753GO:GO:0009941
GO:GO:0009978GO:GO:0010287GO:GO:0016020GO:GO:0016125
GO:GO:0016705GO:GO:0019373GO:GO:0019825GO:GO:0020037
GO:GO:0031407GO:GO:0031408GO:GO:0047987GO:GO:0050832
Gramene:AT5G42650.1gramene_plant_reactome:1119332gramene_plant_reactome:6874095HOGENOM:HOG000238722
InParanoid:Q96242IntAct:Q96242InterPro:IPR001128iPTMnet:Q96242
KEGG:ath:AT5G42650KO:K01723OMA:FNFLARAPaxDb:Q96242
PDB:2RCHPDB:2RCLPDB:2RCMPDB:3CLI
PDB:3DSIPDB:3DSJPDB:3DSKPDBsum:2RCH
PDBsum:2RCLPDBsum:2RCMPDBsum:3CLIPDBsum:3DSI
PDBsum:3DSJPDBsum:3DSKPfam:PF00067Pfam:Q96242
PhylomeDB:Q96242PRIDE:Q96242PRO:PR:Q96242ProteinModelPortal:Q96242
Proteomes:UP000006548RefSeq:NP_199079.1SABIO-RK:Q96242SMR:Q96242
STRING:3702.AT5G42650.1SUPFAM:SSF48264TAIR:AT5G42650tair10-symbols:AOS
tair10-symbols:CYP74Atair10-symbols:DDE2UniGene:At.211UniPathway:UPA00382
UniProt:Q96242
Coordinates (TAIR10) chr5:-:17097803..17099359
Molecular Weight (calculated) 58200.10 Da
IEP (calculated) 9.03
GRAVY (calculated) -0.23
Length 518 amino acids
Sequence (TAIR10)
(BLAST)
001: MASISTPFPI SLHPKTVRSK PLKFRVLTRP IKASGSETPD LTVATRTGSK DLPIRNIPGN YGLPIVGPIK DRWDYFYDQG AEEFFKSRIR KYNSTVYRVN
101: MPPGAFIAEN PQVVALLDGK SFPVLFDVDK VEKKDLFTGT YMPSTELTGG YRILSYLDPS EPKHEKLKNL LFFLLKSSRN RIFPEFQATY SELFDSLEKE
201: LSLKGKADFG GSSDGTAFNF LARAFYGTNP ADTKLKADAP GLITKWVLFN LHPLLSIGLP RVIEEPLIHT FSLPPALVKS DYQRLYEFFL ESAGEILVEA
301: DKLGISREEA THNLLFATCF NTWGGMKILF PNMVKRIGRA GHQVHNRLAE EIRSVIKSNG GELTMGAIEK MELTKSVVYE CLRFEPPVTA QYGRAKKDLV
401: IESHDAAFKV KAGEMLYGYQ PLATRDPKIF DRADEFVPER FVGEEGEKLL RHVLWSNGPE TETPTVGNKQ CAGKDFVVLV ARLFVIEIFR RYDSFDIEVG
501: TSPLGSSVNF SSLRKASF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)