AT5G41730.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.824 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF1221 (InterPro:IPR010632), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT1G64300.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:16684914..16687145 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 81873.30 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.04 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.49 | ||||||||||||||||||||||||||||||||||||
| Length | 711 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEQFRQIGEV LGSLNALMVL QDDILINQRQ CCLLLELFSL AFNTVAEEIR QNLKLEEKHT KWRALEQPLR ELYRVFKEGE LYVKHCMDNS DWWGKVINLH 101: QNKDCVEFHI HNLFCYFSAV VEAIEAAGEI SGLDPSEMER RRVVFSRKYD REWNDPKMFQ WRFGKQYLLS RDICSRFEHS WREDRWNLVE ALQEKRKSDS 201: DDIGKTEKRL ADLLLKKLTG LEQFNGKLFP SSILLGSKDY QVKKRLDADG QYKEIQWLGD SFALRHFFSD LEPLSSEISS LLALCHSNIL QYLCGFYDEE 301: RKECFLVMEL MHKDLQSYMK ENCGPRRRYL FSIPVVIDIM LQIARGMEYL HGNDIFHGDL NPMNIHLKER SHTEGYFHAK ICGFGLSSVV KAQSSSKPGT 401: PDPVIWYAPE VLAEMEQDLN GKTPKSKLTH KADVYSFAMV CFELITGKVP FEDSHLQGEP MTINIRMGER PLFPFPSPKY LVSLIKRCWH SEPSQRPNFS 501: SICRILRYIK KFLVVNPDHG HPQMQTPLVD CWDLEARFLR KFPGDAGSHT ASVNQIPFQL YSYRVLEKEK MNPNSKESSE TSESESVSVV EDPPNAMITR 601: DTKSLCLDTI SEYSDTRSVY SEAPMKKVSA LKKSGEMAKL RRSPSLGSEK LRSAGTSTVK ARSSPKVSPL SPFGRSIKAR KDNRLPLSPM SPLTPGIRRQ 701: QTGHASDSEL T |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)